RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PNRC1Q12796 327 aaPredicted RBP10.96□□□□□ -0.65
VMP1-201ENST00000262291 MBD3L1Q8WWY6 194 aa10.96□□□□□ -0.65
VMP1-201ENST00000262291 RPUSD4Q96CM3 377 aaKnown RBP10.96□□□□□ -0.65
VMP1-201ENST00000262291 PARD6GQ9BYG4 376 aaPredicted RBP10.96□□□□□ -0.65
VMP1-201ENST00000262291 SPG11Q96JI7 2443 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 BCL2P10415 239 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 CD24P25063 80 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 POU2AF1Q16633 256 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 TMEM186Q96B77 213 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 SMIM7Q9BQ49 75 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 COMMD5Q9GZQ3 224 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.66
VMP1-201ENST00000262291 TIMM9Q9Y5J7 89 aa10.96□□□□□ -0.66
VMP1-201ENST00000262291 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
VMP1-201ENST00000262291 OR10J1P30954 320 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 LGALS4P56470 323 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
VMP1-201ENST00000262291 PRCDQ00LT1 54 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 LDLRAD2Q5SZI1 272 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 OR51G1Q8NGK1 321 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 OSR1Q8TAX0 266 aaPredicted RBP10.95□□□□□ -0.66
VMP1-201ENST00000262291 NEIL1Q96FI4 390 aaPredicted RBP10.95□□□□□ -0.66
VMP1-201ENST00000262291 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 WASHC3Q9Y3C0 194 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 H7BYZ3 331 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 IGLV2-23P01705 113 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 IGFBP2P18065 325 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 PDLIM4P50479 330 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 UBE2G2P60604 165 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 PDLIM3Q53GG5 364 aaPredicted RBP10.95□□□□□ -0.66
VMP1-201ENST00000262291 CENPVQ7Z7K6 275 aaPredicted RBP10.95□□□□□ -0.66
VMP1-201ENST00000262291 OR4C13Q8NGP0 309 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 OR1L6Q8NGR2 347 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 RAB1CQ92928 201 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 GGTLC1Q9BX51 225 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 PXMP4Q9Y6I8 212 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 VPS13CQ709C8 3753 aa10.95□□□□□ -0.66
VMP1-201ENST00000262291 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 CCL25O15444 150 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 PRB1P04280 392 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 FAM3BP58499 235 aaPredicted RBP10.94□□□□□ -0.66
VMP1-201ENST00000262291 GNB1P62873 340 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 TMEM177Q53S58 311 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 TIMD4Q96H15 378 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 OR5B12Q96R08 314 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 BET1LQ9NYM9 111 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 CRYBG3Q68DQ2 2970 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 CGB1A6NKQ9 187 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 C17orf112F2Z3M2 114 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 MMDQ15546 238 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 LINC00311Q8N616 119 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 CLEC7AQ9BXN2 247 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
VMP1-201ENST00000262291 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 C20orf202A1L168 122 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 CDC34P49427 236 aaPredicted RBP10.93□□□□□ -0.66
VMP1-201ENST00000262291 CNN1P51911 297 aaKnown RBP10.93□□□□□ -0.66
VMP1-201ENST00000262291 AURKAIP1Q9NWT8 199 aaPredicted RBP10.93□□□□□ -0.66
VMP1-201ENST00000262291 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 USP24Q9UPU5 2620 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
VMP1-201ENST00000262291 GRIFINA4D1Z8 144 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 BUB1B-PAK6H3BSN5 160 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 ACTL6BO94805 426 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 HNF1AP20823 631 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 ACTL10Q5JWF8 245 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 PDPNQ86YL7 162 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 IGHV3-21A0A0B4J1V1 117 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 PAGE4O60829 102 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 IGLV1-47P01700 117 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 WT1-ASQ06250 92 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 ACOT6Q3I5F7 207 aaPredicted RBP10.93□□□□□ -0.66
VMP1-201ENST00000262291 HCP5Q6MZN7 132 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 LHFPL4Q7Z7J7 247 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 OR4P4Q8NGL7 312 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 OR2T6Q8NHC8 308 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 ZNF596Q8TC21 504 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 VN1R17PQ8TDU5 208 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 CTDSP1Q9GZU7 261 aa10.93□□□□□ -0.66
VMP1-201ENST00000262291 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 IGHV1-3A0A0C4DH29 117 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 RNASE2P10153 161 aaKnown RBP10.92□□□□□ -0.66
VMP1-201ENST00000262291 PRRX1P54821 245 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
VMP1-201ENST00000262291 BSXQ3C1V8 233 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 COL5A1-AS1Q5SY13 56 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 RPEQ96AT9 228 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 NPVFQ9HCQ7 196 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 A0A1W2PPV4 95 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 LIPFP07098 398 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 ZFP36P26651 326 aaKnown RBP10.92□□□□□ -0.66
VMP1-201ENST00000262291 IL3RAP26951 378 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
VMP1-201ENST00000262291 STPG3Q8N7X2 389 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms