RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HSBP1O75506 76 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 NRN1LQ496H8 165 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 GCSAMQ8N6F7 178 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 ZNF439Q8NDP4 499 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 SH3BGRL2Q9UJC5 107 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 COL6A6A6NMZ7 2263 aa10.61□□□□□ -0.71
SNX1-201ENST00000261889 CBY3A6NI87 242 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 LINC00869P0C866 280 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 ORM2P19652 201 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 SELENOVP59797 346 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 C1orf174Q8IYL3 243 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 BORCS7Q96B45 105 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 OR8B2Q96RD0 313 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 TPPP3Q9BW30 176 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 CALYQ9NYX4 217 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
SNX1-201ENST00000261889 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.6□□□□□ -0.71
SNX1-201ENST00000261889 M0R2Z0 102 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 ZNF324O75467 553 aaPredicted RBP10.6□□□□□ -0.71
SNX1-201ENST00000261889 APCSP02743 223 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 HCP5Q6MZN7 132 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 CXXC4Q9H2H0 198 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 IDI2-AS1Q9NZ38 188 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 KLRC4-KLRK1H3BQV0 150 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 IGLC2P0DOY2 106 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 C22orf34Q6ZV56 151 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 C20orf144Q9BQM9 153 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 ARL2-SNX15V9GYD0 113 aa10.6□□□□□ -0.71
SNX1-201ENST00000261889 CYC1P08574 325 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 CCL3L1P16619 93 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 LOXL3P58215 753 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 CCL8P80075 99 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 LSM4Q9Y4Z0 139 aaKnown RBP10.59□□□□□ -0.71
SNX1-201ENST00000261889 VWC2LB2RUY7 222 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 SELENOTP62341 195 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 RPP30P78346 268 aaKnown RBP10.59□□□□□ -0.71
SNX1-201ENST00000261889 NEUROG1Q92886 237 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 C20orf202A1L168 122 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 FTH1P19P0C7X4 201 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
SNX1-201ENST00000261889 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 SFTPCP11686 197 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 CD99P14209 185 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 IGLL1P15814 213 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
SNX1-201ENST00000261889 S4R3C0 116 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 C15orf61A6NNL5 157 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 CA7P43166 264 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 ZBTB34Q8NCN2 500 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 C18orf32Q8TCD1 76 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 RNF2Q99496 336 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 TPSG1Q9NRR2 321 aa10.58□□□□□ -0.72
SNX1-201ENST00000261889 IGHV1-18A0A0C4DH31 117 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 CX3CL1P78423 397 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 SPACA3Q8IXA5 215 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 DEFB124Q8NES8 71 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 NPIPB3Q92617 1050 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 IL19Q9UHD0 177 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 IGHV2OR16-5A0A0B4J2B6 119 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 HIGD1CA8MV81 97 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 KLK10O43240 276 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 KIR2DL2P43627 348 aaPredicted RBP10.57□□□□□ -0.72
SNX1-201ENST00000261889 RAB31Q13636 194 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 VAMP3Q15836 100 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 TMEM116Q8NCL8 245 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 ZPBPQ9BS86 351 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 HSPE1P61604 102 aaKnown RBP10.57□□□□□ -0.72
SNX1-201ENST00000261889 MPV17L2Q567V2 206 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 TMEM164Q5U3C3 297 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 LINC00322Q6ZN03 302 aaPredicted RBP10.57□□□□□ -0.72
SNX1-201ENST00000261889 FDCSPQ8NFU4 85 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 PGLYRP4Q96LB8 373 aa10.57□□□□□ -0.72
SNX1-201ENST00000261889 SAA1P0DJI8 122 aaPredicted RBP10.56□□□□□ -0.72
SNX1-201ENST00000261889 SSX8Q7RTT4 187 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 RAB1CQ92928 201 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 TSPOP30536 169 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 STUMQ69YW2 141 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 NUP35Q8NFH5 326 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 RITA1Q96K30 269 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 TRGV10A0A0A0MS01 117 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 CTRLP40313 264 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 FAM90A1Q86YD7 464 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
SNX1-201ENST00000261889 UQCR10Q9UDW1 63 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 ZFP30Q9Y2G7 519 aa10.56□□□□□ -0.72
SNX1-201ENST00000261889 BSNQ9UPA5 3926 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 CUL9Q8IWT3 2517 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
SNX1-201ENST00000261889 PRR20EP86478 221 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 PRR20CP86479 221 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms