RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SLC25A4P12235 298 aa14.36□□□□□ -0.11
CYSTM1-201ENST00000261811 BEAN1Q3B7T3 259 aa14.36□□□□□ -0.11
CYSTM1-201ENST00000261811 KPRPQ5T749 579 aaPredicted RBP14.36□□□□□ -0.11
CYSTM1-201ENST00000261811 GSG1LQ6UXU4 331 aa14.36□□□□□ -0.11
CYSTM1-201ENST00000261811 ZNF320A2RRD8 509 aa14.35□□□□□ -0.11
CYSTM1-201ENST00000261811 ID3Q02535 119 aa14.35□□□□□ -0.11
CYSTM1-201ENST00000261811 REC114Q7Z4M0 266 aa14.35□□□□□ -0.11
CYSTM1-201ENST00000261811 ZBTB8BQ8NAP8 495 aaPredicted RBP14.35□□□□□ -0.11
CYSTM1-201ENST00000261811 MAGT1Q9H0U3 335 aa14.35□□□□□ -0.11
CYSTM1-201ENST00000261811 ZC4H2Q9NQZ6 224 aa14.35□□□□□ -0.11
CYSTM1-201ENST00000261811 TRAV30A0A087WSZ9 112 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 MPTX1A8MV57 137 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 SCGB1D2O95969 90 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 IAPPP10997 89 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 OR4D5Q8NGN0 318 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 OR10C1Q96KK4 312 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 PAIP2BQ9ULR5 123 aaKnown RBP14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 SORL1Q92673 2214 aa14.34□□□□□ -0.11
CYSTM1-201ENST00000261811 NDUFA4O00483 81 aa14.33□□□□□ -0.12
CYSTM1-201ENST00000261811 OR4X1Q8NH49 305 aa14.33□□□□□ -0.12
CYSTM1-201ENST00000261811 C2orf50Q96LR7 162 aa14.33□□□□□ -0.12
CYSTM1-201ENST00000261811 SIGLEC8Q9NYZ4 499 aa14.33□□□□□ -0.12
CYSTM1-201ENST00000261811 UFC1Q9Y3C8 167 aa14.33□□□□□ -0.12
CYSTM1-201ENST00000261811 STRAPQ9Y3F4 350 aaKnown RBP14.33□□□□□ -0.12
CYSTM1-201ENST00000261811 CCSO14618 274 aa14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 IGHV3-48P01763 117 aa14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 ELLP55199 621 aaPredicted RBP14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 DEFA6Q01524 100 aa14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 EGFEM1PQ0D2K5 195 aa14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 RAB40CQ96S21 281 aa14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
CYSTM1-201ENST00000261811 SSNA1O43805 119 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 SSSCA1O60232 199 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 CLN5O75503 358 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 CTSGP08311 255 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 GPX4P36969 197 aaPredicted RBP14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 POLR2GP62487 172 aaKnown RBP eCLIP14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 SPANXN5Q5MJ07 72 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 DYNLRB2Q8TF09 96 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 MARC2Q969Z3 335 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 PSENENQ9NZ42 101 aa14.31□□□□□ -0.12
CYSTM1-201ENST00000261811 A8MWP6 167 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 F8W735 103 aaPredicted RBP14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 L7N2F9 121 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 TMEM50AO95807 157 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 PVALBP20472 110 aaPredicted RBP14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 VAMP2P63027 116 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 CD69Q07108 199 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 CACNG8Q8WXS5 425 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 SLC35E1Q96K37 410 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 SMIM8Q96KF7 97 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 FNDC4Q9H6D8 234 aaPredicted RBP14.3□□□□□ -0.12
CYSTM1-201ENST00000261811 IGHV3-35A0A0C4DH35 117 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 YIF1AO95070 293 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 CSN3P07498 182 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 TAS2R30P59541 319 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 CYCSP99999 105 aaKnown RBP14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 RGS21Q2M5E4 152 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 ZNF600Q6ZNG1 722 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 SLC16A13Q7RTY0 426 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 TMEM116Q8NCL8 245 aa14.29□□□□□ -0.12
CYSTM1-201ENST00000261811 C2orf70A6NJV1 201 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 C15orf62A8K5M9 175 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 MBPP02686 304 aaPredicted RBP14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 ADMP35318 185 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 RND2P52198 227 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 LCN12Q6JVE5 192 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 PRSS54Q6PEW0 395 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 OR1S2Q8NGQ3 325 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 OR2K2Q8NGT1 345 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 TMEM170AQ8WVE7 144 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 TMEM190Q8WZ59 177 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 GINS3Q9BRX5 216 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 C20orf24Q9BUV8 137 aa14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 DAZ1Q9NQZ3 744 aaKnown RBP14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 TECRQ9NZ01 308 aaKnown RBP14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 MRPL27Q9P0M9 148 aaKnown RBP14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 ZNF256Q9Y2P7 627 aaPredicted RBP14.28□□□□□ -0.12
CYSTM1-201ENST00000261811 K7EMT4 169 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 GOSR2O14653 212 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 TSC22D2O75157 780 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 SCAF4O95104 1147 aaKnown RBP14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 IGLV1-51P01701 117 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 FABP1P07148 127 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 FOLR2P14207 255 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 CBLN1P23435 193 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 MLANAQ16655 118 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 C11orf87Q6NUJ2 197 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 ACY3Q96HD9 319 aa14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 LSM5Q9Y4Y9 91 aaKnown RBP14.27□□□□□ -0.12
CYSTM1-201ENST00000261811 H3BP45 60 aa14.26□□□□□ -0.13
CYSTM1-201ENST00000261811 SPNP16150 400 aa14.26□□□□□ -0.13
CYSTM1-201ENST00000261811 OR10J1P30954 320 aa14.26□□□□□ -0.13
CYSTM1-201ENST00000261811 BMI1P35226 326 aa14.26□□□□□ -0.13
CYSTM1-201ENST00000261811 UNQ9165/PRO28630Q6UXU0 137 aa14.26□□□□□ -0.13
CYSTM1-201ENST00000261811 IL34Q6ZMJ4 242 aa14.26□□□□□ -0.13
CYSTM1-201ENST00000261811 RLN2P04090 185 aa14.25□□□□□ -0.13
CYSTM1-201ENST00000261811 KRTAP10-11P60412 298 aa14.25□□□□□ -0.13
CYSTM1-201ENST00000261811 S100A10P60903 97 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms