RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SHROOM2Q13796 1616 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 REREQ9P2R6 1566 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 TCRBV3S1A0A5B6 114 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF670-ZNF695F2Z2N8 137 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 H3BQ15 152 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 CFDP00746 253 aaPredicted RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF32P17041 273 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 CRYBB3P26998 211 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF93P35789 620 aaPredicted RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 FOXA1P55317 472 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 RBM11P57052 281 aaKnown RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 HLA-DRB3P79483 266 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 SLC38A11Q08AI6 406 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 CATR1Q13166 79 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 PNOCQ13519 176 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 MMDQ15546 238 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 KRTAP13-3Q3SY46 172 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 CENPWQ5EE01 88 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 LYRM7Q5U5X0 104 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 AMMECR1LQ6DCA0 310 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 LCN8Q6JVE9 175 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 DNAJC24Q6P3W2 148 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 TIFABQ6ZNK6 161 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 Q6ZRU5 148 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 CLEC20AQ6ZU45 233 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 PCP2Q8IVA1 136 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 SGPP2Q8IWX5 399 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 SAXO1Q8IYX7 474 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 EXOC3-AS1Q8N2X6 119 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 LINC00337Q8N6G1 96 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZIC4Q8N9L1 334 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZFP62Q8NB50 900 aaPredicted RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 LY6G5BQ8NDX9 201 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 OR4B1Q8NGF8 309 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 C10orf82Q8WW14 230 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 TSLPQ969D9 159 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 NEURL3Q96EH8 262 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 EDA2RQ9HAV5 297 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 KCNIP2Q9NS61 270 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 CCDC167Q9P0B6 97 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF443Q9Y2A4 671 aaPredicted RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 WASHC3Q9Y3C0 194 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 NOP16Q9Y3C1 178 aaKnown RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 SLIT3O75094 1523 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 SYCP2Q9BX26 1530 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ANKRD26Q9UPS8 1709 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 NEO1Q92859 1461 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 MYH1P12882 1939 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF106Q9H2Y7 1883 aaKnown RBP2.69□□□□□ -1.98
CCDC54-201ENST00000261058 ABCA9Q8IUA7 1624 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 FOCADQ5VW36 1801 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 MAPKBP1O60336 1514 aa2.69□□□□□ -1.98
CCDC54-201ENST00000261058 hCG_1818297A0A087WSY0 165 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 IGKV1-8A0A0C4DH67 115 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LOC107984640A0A0U1RRK4 108 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LOC389332A0A1B0GUA5 103 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 OR51F1A6NGY5 319 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 A8MT66 165 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 C11orf94C9JXX5 98 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 F5H5P2 479 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 CCDC179H3BU77 68 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 RTL8CO15255 209 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 RER1O15258 196 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 IFITM1P13164 125 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 CTSEP14091 401 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 GADD45AP24522 165 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 PPP1CCP36873 323 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 KLRD1Q13241 179 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 ENDOGQ14249 297 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HES1Q14469 280 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 C12orf74Q32Q52 190 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 FAM222AQ5U5X8 452 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 MRPL54Q6P161 138 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 HEPN1Q6WQI6 88 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 KCNRGQ8N5I3 272 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 ANKRD29Q8N6D5 301 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 C15orf56Q8N910 161 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 OR5D14Q8NGL3 314 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 FRZBQ92765 325 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 PEBP4Q96S96 227 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 TMEM147Q9BVK8 224 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SLC25A2Q9BXI2 301 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 CA10Q9NS85 328 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 FUT9Q9Y231 359 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 FIS1Q9Y3D6 152 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 MPC1Q9Y5U8 109 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 NCOA2Q15596 1464 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 RPRD2Q5VT52 1461 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 MYH9P35579 1960 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 DIP2AQ14689 1571 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 COL1A2P08123 1366 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 LRRIQ1Q96JM4 1722 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SIPA1L1O43166 1804 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 XIRP1Q702N8 1843 aaKnown RBP2.68□□□□□ -1.98
CCDC54-201ENST00000261058 A0A087X0T9 212 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 C5orf63A6NC05 138 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 KNCNA6PVL3 124 aa2.68□□□□□ -1.98
CCDC54-201ENST00000261058 H3BP45 60 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms