RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CLRN3Q8NCR9 226 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 TP53RKQ96S44 253 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 NDUFA4O00483 81 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 PRB1P04280 392 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 AMY1AP04745 511 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 MYCNOSP40205 109 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 PIKFYVEQ9Y2I7 2098 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 VKORC1L1Q8N0U8 176 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 CKS2P33552 79 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 ICAM4Q14773 271 aa10.97□□□□□ -0.65
PRPF38A-201ENST00000257181 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
PRPF38A-201ENST00000257181 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
PRPF38A-201ENST00000257181 PLA2G2AP14555 144 aa10.96□□□□□ -0.65
PRPF38A-201ENST00000257181 MORN3Q6PF18 240 aaPredicted RBP10.96□□□□□ -0.65
PRPF38A-201ENST00000257181 RFNGQ9Y644 331 aa10.96□□□□□ -0.65
PRPF38A-201ENST00000257181 CCKARP32238 428 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 CAMPP49913 170 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 CFAP161Q6P656 301 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 ARL2-SNX15V9GYD0 113 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 CCDC88CQ9P219 2028 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 CFPP27918 469 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 FAM90A2PQ658T7 463 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 OR5AN1Q8NGI8 311 aa10.96□□□□□ -0.66
PRPF38A-201ENST00000257181 GOLT1AQ6ZVE7 132 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 F2Z2F3 143 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 CEP290O15078 2479 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 TRAV8-6A0A0B4J262 113 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 LYPD2Q6UXB3 125 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 GEMIN7Q9H840 131 aaKnown RBP10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 ARL14EPLP0DKL9 152 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 SRIP30626 198 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 YPEL3P61236 119 aaPredicted RBP10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 OR11H6Q8NGC7 330 aa10.95□□□□□ -0.66
PRPF38A-201ENST00000257181 CD8AP01732 235 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 MPTX1A8MV57 137 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 LOXP28300 417 aaPredicted RBP10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 EFNB1P98172 346 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 RPRMLQ8N4K4 120 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 PDE6HQ13956 83 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 MST1LQ2TV78 715 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 LINC01559Q495D7 138 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 OR5AC2Q9NZP5 309 aa10.94□□□□□ -0.66
PRPF38A-201ENST00000257181 PEX7O00628 323 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 IGHV3-23P01764 117 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 RNASE4P34096 147 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 FAM3BP58499 235 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 HOXA3O43365 443 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 HTN3P15516 51 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 ZNF79Q15937 498 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 KLF17Q5JT82 389 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 SGMS2Q8NHU3 365 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 VOPP1Q96AW1 172 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 GSX1Q9H4S2 264 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 IGHV4-39P01824 125 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 LINC00587B1AMM8 73 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 PLA2G10O15496 165 aa10.93□□□□□ -0.66
PRPF38A-201ENST00000257181 ZNF688P0C7X2 276 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 CGB1A6NKQ9 187 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 NMUP48645 174 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 MFAP2P55001 183 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 ST6GAL2Q96JF0 529 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 Q9H3A6 140 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 J3QR89 54 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 SOD3P08294 240 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 ERASQ7Z444 233 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 OR4D5Q8NGN0 318 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 JKAMPQ9P055 326 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 RHODO00212 210 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 IGFBP2P18065 325 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 OR8A1Q8NGG7 326 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 COQ2Q96H96 371 aa10.92□□□□□ -0.66
PRPF38A-201ENST00000257181 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 A6NJY4 79 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 M0R2Z0 102 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 NUDT3O95989 172 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 ZNF705AQ6ZN79 300 aaPredicted RBP10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 SH2D6Q7Z4S9 175 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 MBD6Q96DN6 1003 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 PRR13Q9NZ81 148 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 KLK5Q9Y337 293 aaPredicted RBP10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 IGKV1-12A0A0C4DH73 117 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 TMEM218A2RU14 115 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 PPBPP02775 128 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 NMSQ5H8A3 153 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 FAM103A1Q9BTL3 118 aaKnown RBP10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 RNF152Q8N8N0 203 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 Q8NA96 180 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms