RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ACY3Q96HD9 319 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 DERL1Q9BUN8 251 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 PARLQ9H300 379 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 SDF2L1Q9HCN8 221 aa11.86□□□□□ -0.51
MBD4-201ENST00000249910 IGHV1-3A0A0C4DH29 117 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 SSBP2P81877 361 aaPredicted RBP11.85□□□□□ -0.51
MBD4-201ENST00000249910 ERHP84090 104 aaKnown RBP11.85□□□□□ -0.51
MBD4-201ENST00000249910 ADIRFQ15847 76 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 VSTM2AQ8TAG5 236 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 M0R143 59 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 CXCL1P09341 107 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 OR10J1P30954 320 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 MC5RP33032 325 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 PRRX1P54821 245 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 KLRD1Q13241 179 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 PMS2P11Q13670 270 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 FAM78BQ5VT40 261 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 RUSC1-AS1Q66K80 236 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 FAM71F2Q6NXP2 309 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 Q8WTZ3 238 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 ITLN2Q8WWU7 325 aaPredicted RBP11.85□□□□□ -0.51
MBD4-201ENST00000249910 RAB1CQ92928 201 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
MBD4-201ENST00000249910 UBTD1Q9HAC8 227 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 HILPDAQ9Y5L2 63 aa11.85□□□□□ -0.51
MBD4-201ENST00000249910 TGIF2-C20orf24A0A0A6YYL0 155 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 LINC00869P0C866 280 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 GNB1P62873 340 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 RAB31Q13636 194 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 ELOBQ15370 118 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 RPEQ96AT9 228 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 TIMD4Q96H15 378 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 PCGF1Q9BSM1 259 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 LIPFP07098 398 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 IL3RAP26951 378 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 RPL29P47914 159 aaKnown RBP11.84□□□□□ -0.51
MBD4-201ENST00000249910 PRR20EP86478 221 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 PRR20CP86479 221 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 PRR20DP86480 221 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 PRR20BP86481 221 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 PRR20AP86496 221 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 VMA21Q3ZAQ7 101 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 MANBALQ9NQG1 85 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 EPG5Q9HCE0 2579 aa11.84□□□□□ -0.51
MBD4-201ENST00000249910 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 CD69Q07108 199 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 TNXAQ16473 311 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 MIR17HGQ75NE6 70 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 MRPL36Q9P0J6 103 aaKnown RBP11.83□□□□□ -0.52
MBD4-201ENST00000249910 USP24Q9UPU5 2620 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 PGPEP1LA6NFU8 196 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 AREGP15514 252 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
MBD4-201ENST00000249910 TMEM241Q24JQ0 296 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 LHFPL4Q7Z7J7 247 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 FAM210BQ96KR6 192 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
MBD4-201ENST00000249910 A0A087WWC5 75 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 FCN1O00602 326 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 NDUFB4O95168 129 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 LGALS7P47929 136 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 SSBP3Q9BWW4 388 aaPredicted RBP11.82□□□□□ -0.52
MBD4-201ENST00000249910 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 RPLP1P05386 114 aaKnown RBP11.82□□□□□ -0.52
MBD4-201ENST00000249910 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
MBD4-201ENST00000249910 LOC105371242A0A075B767 164 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 FSTL3O95633 263 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
MBD4-201ENST00000249910 ZNF90Q03938 601 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
MBD4-201ENST00000249910 PSG5Q15238 335 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 DTX2Q86UW9 622 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 LY6G5BQ8NDX9 201 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 CLUHP3Q96NS8 147 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 DOK5Q9P104 306 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 SIGLEC9Q9Y336 463 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 YTHDF2Q9Y5A9 579 aaKnown RBP11.81□□□□□ -0.52
MBD4-201ENST00000249910 ZNF462Q96JM2 2506 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 DOPEY1Q5JWR5 2465 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 PHOX2AO14813 284 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 TIMM23O14925 209 aa11.81□□□□□ -0.52
MBD4-201ENST00000249910 CXorf1O96002 111 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms