RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SSX8Q7RTT4 187 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 MMD2Q8IY49 270 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 ZFP30Q9Y2G7 519 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 LRRC10Q5BKY1 277 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 COL5A1-AS1Q5SY13 56 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 LYPD2Q6UXB3 125 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 OR2T6Q8NHC8 308 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 ST6GALNAC6Q969X2 333 aa17.51■□□□□ 0.39
SH2D3A-201ENST00000245908 CGB1A6NKQ9 187 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 TPPP2P59282 170 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 OR1L6Q8NGR2 347 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 CCL17Q92583 94 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 MRPL18Q9H0U6 180 aaKnown RBP17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 IGLV2-23P01705 113 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 ESDP10768 282 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 DIAPH2-AS1Q14236 149 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 Q6ZWC4 215 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 FAM167A-AS1Q96KT0 104 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 SLC25A2Q9BXI2 301 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 OSTCQ9NRP0 149 aa17.5■□□□□ 0.39
SH2D3A-201ENST00000245908 WT1-ASQ06250 92 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 ABHD17AQ96GS6 310 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 CTSZQ9UBR2 303 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 WASHC3Q9Y3C0 194 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 ZNF292O60281 2723 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 ZNF137PP52743 207 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 DLX6P56179 175 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 SUMO1P63165 101 aaKnown RBP17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 TIGITQ495A1 244 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 ASCL5Q7RTU5 278 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 DNAJC4Q9NNZ3 241 aa17.49■□□□□ 0.39
SH2D3A-201ENST00000245908 TRBV9A0A0B4J1U6 114 aa17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 GRIFINA4D1Z8 144 aa17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 SIAH2O43255 324 aa17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 LOXP28300 417 aaPredicted RBP17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 VAMP8Q9BV40 100 aa17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 TP53TG3Q9ULZ0 132 aa17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 RP1L1Q8IWN7 2480 aaPredicted RBP17.48■□□□□ 0.39
SH2D3A-201ENST00000245908 IGLV2-8P01709 118 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 TDRG1Q3Y452 100 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 MORN5Q5VZ52 161 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 Q8NA96 180 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 IGF2BP2-AS1Q96M15 143 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 FNDC4Q9H6D8 234 aaPredicted RBP17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 ZNF430Q9H8G1 570 aaPredicted RBP17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 VSTM5A8MXK1 200 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 IER3P46695 156 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 PPOXP50336 477 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 SSBP2P81877 361 aaPredicted RBP17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 C10orf55Q5SWW7 151 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 GFRALQ6UXV0 394 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 OR8I2Q8N0Y5 310 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 RNASE6Q93091 150 aaKnown RBP17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 KAAG1Q9UBP8 84 aa17.47■□□□□ 0.39
SH2D3A-201ENST00000245908 ISLRO14498 428 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 SUB1P53999 127 aaKnown RBP eCLIP17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 GNB1LQ9BYB4 327 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 RNASE7Q9H1E1 156 aaKnown RBP17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 SH3BGRL2Q9UJC5 107 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 ZNF835Q9Y2P0 537 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 ZGRF1Q86YA3 2104 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 AKAP13Q12802 2813 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 TRAV5A0A0B4J249 113 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 FCN1O00602 326 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 CRISP2P16562 243 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 UBE2L3P68036 154 aaKnown RBP17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 TMEM155Q4W5P6 130 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 THAP8Q8NA92 274 aa17.46■□□□□ 0.39
SH2D3A-201ENST00000245908 LINC00310P59036 64 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 CX3CL1P78423 397 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 OR5AU1Q8NGC0 362 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 OR1L4Q8NGR5 311 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 PAM16Q9Y3D7 125 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 LAMA5O15230 3695 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 TCRBV4S1A1TA0A5B7 111 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 SNURFLB1AK76 121 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 TCF21O43680 179 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 COX7A2P2O60397 106 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 FRMD6-AS1P0C7T7 363 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 BATFQ16520 125 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 VMA21Q3ZAQ7 101 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 PRSS33Q8NF86 280 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 NPIPB3Q92617 1050 aa17.45■□□□□ 0.38
SH2D3A-201ENST00000245908 IGKV1D-37A0A075B6S9 117 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 RPL19P84098 196 aaKnown RBP17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 C11orf42Q8N5U0 333 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 ST6GALNAC3Q8NDV1 305 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 SHISA9B4DS77 424 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 MC5RP33032 325 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 C10orf113Q5VZT2 155 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 ZNF355PQ9NSJ1 428 aa17.44■□□□□ 0.38
SH2D3A-201ENST00000245908 Q0VG73 95 aa17.43■□□□□ 0.38
SH2D3A-201ENST00000245908 MRGPRG-AS1Q2M3A8 158 aa17.43■□□□□ 0.38
SH2D3A-201ENST00000245908 PATE2Q6UY27 113 aa17.43■□□□□ 0.38
SH2D3A-201ENST00000245908 HSPB9Q9BQS6 159 aa17.43■□□□□ 0.38
SH2D3A-201ENST00000245908 DYNLRB1Q9NP97 96 aa17.43■□□□□ 0.38
SH2D3A-201ENST00000245908 CDC42EP3Q9UKI2 254 aa17.43■□□□□ 0.38
SH2D3A-201ENST00000245908 SLC25A17O43808 307 aa17.42■□□□□ 0.38
SH2D3A-201ENST00000245908 MT-ND6P03923 174 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms