RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CSPG4Q6UVK1 2322 aa11.16□□□□□ -0.62
NEK9-201ENST00000238616 PAX4O43316 350 aa11.16□□□□□ -0.62
NEK9-201ENST00000238616 ZNF250P15622 560 aa11.16□□□□□ -0.62
NEK9-201ENST00000238616 TIMM23BQ5SRD1 257 aa11.16□□□□□ -0.62
NEK9-201ENST00000238616 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
NEK9-201ENST00000238616 EXPH5Q8NEV8 1989 aa11.16□□□□□ -0.62
NEK9-201ENST00000238616 PSMG4Q5JS54 123 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 MTURNQ8N3F0 131 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 FNDC4Q9H6D8 234 aaPredicted RBP11.15□□□□□ -0.62
NEK9-201ENST00000238616 CELA3BP08861 270 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 CXCL2P19875 107 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 VAX1Q5SQQ9 334 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 ORMDL3Q8N138 153 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 ZCCHC24Q8N2G6 241 aaKnown RBP11.15□□□□□ -0.62
NEK9-201ENST00000238616 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.62
NEK9-201ENST00000238616 MIXL1Q9H2W2 232 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 TFF3Q07654 80 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 ZNF562Q6V9R5 426 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 ZNF257Q9Y2Q1 563 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 IMMP2LQ96T52 175 aa11.15□□□□□ -0.62
NEK9-201ENST00000238616 GPX4P36969 197 aaPredicted RBP11.15□□□□□ -0.63
NEK9-201ENST00000238616 CRIM1Q9NZV1 1036 aa11.15□□□□□ -0.63
NEK9-201ENST00000238616 PLXNA4Q9HCM2 1894 aa11.15□□□□□ -0.63
NEK9-201ENST00000238616 TIAF1O95411 115 aa11.15□□□□□ -0.63
NEK9-201ENST00000238616 FOXD3Q9UJU5 478 aaPredicted RBP11.14□□□□□ -0.63
NEK9-201ENST00000238616 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 GATA2P23769 480 aaPredicted RBP11.14□□□□□ -0.63
NEK9-201ENST00000238616 SAP25Q8TEE9 199 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 F8WEM9 126 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 PLNP26678 52 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 GNG5P63218 68 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 DERL1Q9BUN8 251 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 CELA3AP09093 270 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 EGR4Q05215 589 aa11.14□□□□□ -0.63
NEK9-201ENST00000238616 LYNX1G3V0Z9 82 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 LYNX1P0DP58 116 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 OR52E5Q8NH55 327 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 HS3ST3B1Q9Y662 390 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 SMDT1Q9H4I9 107 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 RNASE7Q9H1E1 156 aaKnown RBP11.13□□□□□ -0.63
NEK9-201ENST00000238616 GLRXP35754 106 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 TRAV8-4A0A0B4J246 113 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 TOMM40O96008 361 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 CECR9P0C854 216 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 IGKV1-8A0A0C4DH67 115 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 CLPSP04118 112 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
NEK9-201ENST00000238616 STPG2Q8N412 459 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
NEK9-201ENST00000238616 GLI3P10071 1580 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 M0R2P5 195 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 KLF4O43474 513 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
NEK9-201ENST00000238616 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 TM4SF5O14894 197 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 CTSBP07858 339 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 RND3P61587 244 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 SIGLEC15Q6ZMC9 328 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 TMEM91Q6ZNR0 172 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 RFPL3SP0C7P2 107 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 SLC25A47Q6Q0C1 308 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 PKIBQ9C010 78 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 RHOGP84095 191 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 FAM216BQ8N7L0 139 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 ZP1P60852 638 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
NEK9-201ENST00000238616 C1QCP02747 245 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
NEK9-201ENST00000238616 SSBP4Q9BWG4 385 aaPredicted RBP11.11□□□□□ -0.63
NEK9-201ENST00000238616 MS4A6AQ9H2W1 248 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 FAM209AQ5JX71 171 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 KIAA1671Q9BY89 1806 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 DDTP30046 118 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 RPP21Q9H633 154 aaKnown RBP11.11□□□□□ -0.63
NEK9-201ENST00000238616 COL18A1P39060 1754 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 PLXNA3P51805 1871 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 C1orf122Q6ZSJ8 110 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 NGFRP08138 427 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 FUT5Q11128 374 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 AQP3Q92482 292 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 ZSWIM8A7E2V4 1837 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
NEK9-201ENST00000238616 NHP2Q9NX24 153 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms