RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 LY6G5BQ8NDX9 201 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 OR10D4PQ8NGN7 298 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 OR1L4Q8NGR5 311 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 SGMS2Q8NHU3 365 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 TPSG1Q9NRR2 321 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 MIOXQ9UGB7 285 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 ZZEF1O43149 2961 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 K7EN84 100 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 ENSAO43768 121 aaKnown RBP12.99□□□□□ -0.33
UBE3D-201ENST00000237186 RPL15P61313 204 aaKnown RBP12.99□□□□□ -0.33
UBE3D-201ENST00000237186 CTAG1AP78358 180 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 PAX2Q02962 417 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 ETFRF1Q6IPR1 90 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 PFDN5Q99471 154 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 RNF5Q99942 180 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 PRORYQ9H606 182 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 INSIG2Q9Y5U4 225 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 HELTA6NFD8 242 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 OR7C2O60412 319 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 OR1P1Q8NH06 330 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 HIST1H2BLQ99880 126 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 SIGLEC9Q9Y336 463 aa12.99□□□□□ -0.33
UBE3D-201ENST00000237186 IGHV3-72A0A0B4J1Y9 119 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 ZNF320A2RRD8 509 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 GGTLC3B5MD39 225 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 LY6LH3BQJ8 138 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 RPL27AP46776 148 aaKnown RBP12.98□□□□□ -0.33
UBE3D-201ENST00000237186 SLC25A2Q9BXI2 301 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 RAB1BQ9H0U4 201 aa12.98□□□□□ -0.33
UBE3D-201ENST00000237186 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
UBE3D-201ENST00000237186 OR10J4P0C629 311 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 CRYBB3P26998 211 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 COMPP49747 757 aaPredicted RBP12.97□□□□□ -0.33
UBE3D-201ENST00000237186 SSBP2P81877 361 aaPredicted RBP12.97□□□□□ -0.33
UBE3D-201ENST00000237186 CDSNQ15517 529 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 OR8B3Q8NGG8 313 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 OR8B2Q96RD0 313 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 IL36BQ9NZH7 164 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 ATRXP46100 2492 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 BPIFB3P59826 476 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 YPEL3P61236 119 aaPredicted RBP12.97□□□□□ -0.33
UBE3D-201ENST00000237186 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 MRPL36Q9P0J6 103 aaKnown RBP12.97□□□□□ -0.33
UBE3D-201ENST00000237186 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
UBE3D-201ENST00000237186 ANKHD1Q8IWZ3 2542 aaKnown RBP12.97□□□□□ -0.33
UBE3D-201ENST00000237186 KALRNO60229 2985 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 XKRY2A2RUG3 117 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 LIPFP07098 398 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 FABP4P15090 132 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 GNG4P50150 75 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.33
UBE3D-201ENST00000237186 ZNF90Q03938 601 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 LY6DQ14210 128 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 C10orf113Q5VZT2 155 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 TMEM116Q8NCL8 245 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 CBLN4Q9NTU7 201 aa12.96□□□□□ -0.33
UBE3D-201ENST00000237186 MALRD1Q5VYJ5 2156 aa12.96□□□□□ -0.34
UBE3D-201ENST00000237186 CORTO00230 105 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 COX7A2P2O60397 106 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 SFTPCP11686 197 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 CNTFRP26992 372 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 MFAP2P55001 183 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 CENPWQ5EE01 88 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 MORN5Q5VZ52 161 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 C11orf71Q6IPW1 123 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
UBE3D-201ENST00000237186 TRGV9Q99603 122 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 TNXAQ16473 311 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 RPEQ96AT9 228 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 ZNF355PQ9NSJ1 428 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 TRAPPC1Q9Y5R8 145 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 V9GYV3 84 aa12.95□□□□□ -0.34
UBE3D-201ENST00000237186 TEX22C9J3V5 150 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 C22orf46C9J442 243 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 GCGP01275 180 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 REG1AP05451 166 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 HIST1H1BP16401 226 aaKnown RBP12.94□□□□□ -0.34
UBE3D-201ENST00000237186 HNF1AP20823 631 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 CNN1P51911 297 aaKnown RBP12.94□□□□□ -0.34
UBE3D-201ENST00000237186 DLX1P56177 255 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 TAS2R60P59551 318 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 UBE2L3P68036 154 aaKnown RBP12.94□□□□□ -0.34
UBE3D-201ENST00000237186 OR11H6Q8NGC7 330 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
UBE3D-201ENST00000237186 SRSF8Q9BRL6 282 aaKnown RBP12.94□□□□□ -0.34
UBE3D-201ENST00000237186 PAXXQ9BUH6 204 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 OSTCQ9NRP0 149 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 TNFRSF19Q9NS68 423 aa12.94□□□□□ -0.34
UBE3D-201ENST00000237186 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
UBE3D-201ENST00000237186 IGLV2-8P01709 118 aa12.93□□□□□ -0.34
UBE3D-201ENST00000237186 TIGITQ495A1 244 aa12.93□□□□□ -0.34
UBE3D-201ENST00000237186 HCP5Q6MZN7 132 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms