RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 NOTCH2Q04721 2471 aa8.2□□□□□ -1.1
PRAMEF4-201ENST00000235349 TLN2Q9Y4G6 2542 aa8.2□□□□□ -1.1
PRAMEF4-201ENST00000235349 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 A0A1W2PN81 502 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 USF1P22415 310 aaPredicted RBP8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 G6PCP35575 357 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 CHRNA7P36544 502 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 PRRX1P54821 245 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 RBX1P62877 108 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 CATR1Q13166 79 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 ZNF726P1Q15940 193 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 LCN15Q6UWW0 184 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 C1orf122Q6ZSJ8 110 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 KRTAP1-3Q8IUG1 177 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 C22orf15Q8WYQ4 148 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 LHX4Q969G2 390 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 TBX15Q96SF7 602 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 PCGF1Q9BSM1 259 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 GSX1Q9H4S2 264 aaPredicted RBP8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 CREBBPQ92793 2442 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 KRASP01116 189 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 SLC25A16P16260 332 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 THBS3P49746 956 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 SELENOTP62341 195 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 HLA-DRB5Q30154 266 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 Q5PR19 223 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 LRRC75A-AS1Q8N1F1 130 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 KIR3DL3Q8N743 410 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 OR4P4Q8NGL7 312 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 TAF15Q92804 592 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 MBD6Q96DN6 1003 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 RSG1Q9BU20 258 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 INSIG2Q9Y5U4 225 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 ACANP16112 2415 aa8.19□□□□□ -1.1
PRAMEF4-201ENST00000235349 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 TOX4O94842 621 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 CNN1P51911 297 aaKnown RBP8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 ZNF137PP52743 207 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 PAX8Q06710 450 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 TMEM267Q0VDI3 215 aaPredicted RBP8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 TEX43Q6ZNM6 134 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 LHFPL4Q7Z7J7 247 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 VKORC1L1Q8N0U8 176 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 OR11H6Q8NGC7 330 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 ORAOV1Q8WV07 137 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 NABP2Q9BQ15 211 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 TXNDC17Q9BRA2 123 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 RBKSQ9H477 322 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 AURKAIP1Q9NWT8 199 aaPredicted RBP8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 MYO9AB2RTY4 2548 aa8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
PRAMEF4-201ENST00000235349 TRAV9-1A0A075B6T8 112 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 IGHV3-72A0A0B4J1Y9 119 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 NXPH3O95157 252 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 IGKV1-16P04430 117 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 RPL29P47914 159 aaKnown RBP8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 PAFAH1B2P68402 229 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 ZNF705AQ6ZN79 300 aaPredicted RBP8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 OR2D3Q8NGH3 330 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 TMEM186Q96B77 213 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 RITA1Q96K30 269 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 SRRM4A7MD48 611 aaKnown RBP8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 H0YJW9 148 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 PDE6DO43924 150 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 P0C879 139 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 ELLP55199 621 aaPredicted RBP8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 LEMD1Q68G75 181 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 SLC24A4Q8NFF2 622 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 OR5AN1Q8NGI8 311 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 ADTRPQ96IZ2 230 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 Q96MF0 132 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 PARLQ9H300 379 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 SLC35D1Q9NTN3 355 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 HILPDAQ9Y5L2 63 aa8.17□□□□□ -1.1
PRAMEF4-201ENST00000235349 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 IGHV3OR16-10A0A075B7F0 116 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 TRAV3A0A0B4J244 114 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 ESDP10768 282 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 FGF8P55075 233 aaPredicted RBP8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 RPP30P78346 268 aaKnown RBP8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 FOXL1Q12952 345 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 TMEM14EPQ6UXP3 125 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 DYNAPQ8N1N2 210 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 C1orf159Q96HA4 380 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 AJUBAQ96IF1 538 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 OR4C12Q96R67 309 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 TMEM147Q9BVK8 224 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 CACNG5Q9UF02 275 aa8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
PRAMEF4-201ENST00000235349 IGHV1-3A0A0C4DH29 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms