RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LINC00205P59089 165 aa16.74■□□□□ 0.27
SNX3-201ENST00000230085 OR8I2Q8N0Y5 310 aa16.74■□□□□ 0.27
SNX3-201ENST00000230085 TECRQ9NZ01 308 aaKnown RBP16.74■□□□□ 0.27
SNX3-201ENST00000230085 METRNQ9UJH8 293 aa16.74■□□□□ 0.27
SNX3-201ENST00000230085 IGHV3-43A0A0B4J1X8 118 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 A0A1W2PS18 150 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 IGLC2P0DOY2 106 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 IGLC3P0DOY3 106 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 IGHV3-43DP0DP04 118 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 CD33P20138 364 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 PRDX2P32119 198 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 PPOXP50336 477 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 BSPH1Q075Z2 132 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 TIGITQ495A1 244 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 SPATA31B1PQ5VZV4 182 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 KLHDC1Q8N7A1 406 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 FAM169BQ8N8A8 192 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 IGF2BP2-AS1Q96M15 143 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 NAT8BQ9UHF3 227 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 ROS1P08922 2347 aa16.73■□□□□ 0.27
SNX3-201ENST00000230085 HECTD1Q9ULT8 2610 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 SRRM5B3KS81 715 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 F2Z2F3 143 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 IGLV2-8P01709 118 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 CECR9P0C854 216 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 CD40P25942 277 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 SUMO1P63165 101 aaKnown RBP16.72■□□□□ 0.27
SNX3-201ENST00000230085 TMEM108Q6UXF1 575 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 FAM231DQ6ZW35 169 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 SSMEM1Q8WWF3 244 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 GNG12Q9UBI6 72 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 A6NNC1 897 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 TMEM30BQ3MIR4 351 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 GCSAMQ8N6F7 178 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 OR4P4Q8NGL7 312 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 ORAOV1Q8WV07 137 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 MRPS16Q9Y3D3 137 aaKnown RBP16.72■□□□□ 0.27
SNX3-201ENST00000230085 RNF114Q9Y508 228 aa16.72■□□□□ 0.27
SNX3-201ENST00000230085 BMPR1BO00238 502 aa16.71■□□□□ 0.27
SNX3-201ENST00000230085 LOXP28300 417 aaPredicted RBP16.71■□□□□ 0.27
SNX3-201ENST00000230085 TAS2R45P59539 299 aa16.71■□□□□ 0.27
SNX3-201ENST00000230085 NIT1Q86X76 327 aa16.71■□□□□ 0.27
SNX3-201ENST00000230085 OR5B3Q8NH48 314 aa16.71■□□□□ 0.27
SNX3-201ENST00000230085 RFESDQ8TAC1 157 aa16.71■□□□□ 0.27
SNX3-201ENST00000230085 MRPL32Q9BYC8 188 aaKnown RBP16.71■□□□□ 0.27
SNX3-201ENST00000230085 CENPEQ02224 2701 aa16.7■□□□□ 0.26
SNX3-201ENST00000230085 TRAV3A0A0B4J244 114 aa16.7■□□□□ 0.26
SNX3-201ENST00000230085 IZUMO1RA6ND01 250 aa16.7■□□□□ 0.26
SNX3-201ENST00000230085 PMCHL1Q16048 86 aa16.7■□□□□ 0.26
SNX3-201ENST00000230085 PRNDQ9UKY0 176 aa16.7■□□□□ 0.26
SNX3-201ENST00000230085 LRBAP50851 2863 aa16.7■□□□□ 0.26
SNX3-201ENST00000230085 HRNRQ86YZ3 2850 aaPredicted RBP16.7■□□□□ 0.26
SNX3-201ENST00000230085 FOXH1O75593 365 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 PLAUP00749 431 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 AMTP48728 403 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 KLF5Q13887 457 aaPredicted RBP16.69■□□□□ 0.26
SNX3-201ENST00000230085 C3orf36Q3SXR2 165 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 SPATA45Q537H7 98 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 MIR17HGQ75NE6 70 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 ZNF503Q96F45 646 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 NABP2Q9BQ15 211 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 CACNA1DQ01668 2161 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 IGKV1D-17A0A075B6S4 117 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 CA2P00918 260 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 HNF1AP20823 631 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 SELENOVP59797 346 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 OR4A47Q6IF82 309 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 MBD6Q96DN6 1003 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 ENY2Q9NPA8 101 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 IDI2-AS1Q9NZ38 188 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 CDC42EP3Q9UKI2 254 aa16.69■□□□□ 0.26
SNX3-201ENST00000230085 A0A1W2PPR1 153 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 TIMM8AO60220 97 aaPredicted RBP16.68■□□□□ 0.26
SNX3-201ENST00000230085 HYPMO75409 117 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 FRMD6-AS1P0C7T7 363 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 PRCDQ00LT1 54 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 OR5I1Q13606 314 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 C2orf83Q53S99 150 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 TPRX1Q8N7U7 411 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 LRRC29Q8WV35 223 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 LINC00574Q9H8X3 128 aa16.68■□□□□ 0.26
SNX3-201ENST00000230085 FBN2P35556 2912 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 CSMD2Q7Z408 3487 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 IGHV2OR16-5A0A0B4J2B6 119 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 INS-IGF2F8WCM5 200 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 CD3EP07766 207 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 CRYBB3P26998 211 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 ZNF134P52741 427 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 KRTDAPP60985 99 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 PSG5Q15238 335 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 RPL39P5Q59GN2 51 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 DCTN5Q9BTE1 182 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 DSCAML1Q8TD84 2053 aa16.67■□□□□ 0.26
SNX3-201ENST00000230085 OR2J3O76001 311 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 TOMM40O96008 361 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 C3orf79P0CE67 100 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 IBA57Q5T440 356 aaKnown RBP16.66■□□□□ 0.26
SNX3-201ENST00000230085 ZNF439Q8NDP4 499 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 OR1L8Q8NGR8 309 aa16.66■□□□□ 0.26
SNX3-201ENST00000230085 CHRDL1Q9BU40 450 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms