RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 LEAP2Q969E1 77 aa11.53□□□□□ -0.56
SF1-201ENST00000227503 TECTAO75443 2155 aa11.52□□□□□ -0.56
SF1-201ENST00000227503 ISLRO14498 428 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 TOX4O94842 621 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 CD59P13987 128 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 AREGP15514 252 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 ZNF137PP52743 207 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 SNRNP40Q96DI7 357 aaKnown RBP11.52□□□□□ -0.57
SF1-201ENST00000227503 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.57
SF1-201ENST00000227503 ATP1A1-AS1Q5TC04 95 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 SLC35E4Q6ICL7 350 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 FER1L6-AS2Q96M78 137 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 NABP2Q9BQ15 211 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 TCF19Q9Y242 345 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 LY96Q9Y6Y9 160 aa11.52□□□□□ -0.57
SF1-201ENST00000227503 LYZL6O75951 148 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 OR1B1Q8NGR6 318 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 KLF14Q8TD94 323 aaPredicted RBP11.51□□□□□ -0.57
SF1-201ENST00000227503 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 CHRDL1Q9BU40 450 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 OOEPA6NGQ2 149 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 SAP30LQ9HAJ7 183 aa11.51□□□□□ -0.57
SF1-201ENST00000227503 CADP27708 2225 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 APOA2P02652 100 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 GPR12P47775 334 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 OBP2BQ9NPH6 170 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 TMEM140Q9NV12 185 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 HILPDAQ9Y5L2 63 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 C7orf71A4D174 169 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 CSN3P07498 182 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 Q5PR19 223 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 DEFB123Q8N688 67 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 SPENQ96T58 3664 aaKnown RBP11.5□□□□□ -0.57
SF1-201ENST00000227503 CACNA1HO95180 2353 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 KLK10O43240 276 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 TNFSF15O95150 251 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 IGHV3-48P01763 117 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 PYYP10082 97 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 DUTP33316 252 aaKnown RBP11.5□□□□□ -0.57
SF1-201ENST00000227503 GNG5P63218 68 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 C1orf229Q6ZS94 237 aaPredicted RBP11.5□□□□□ -0.57
SF1-201ENST00000227503 TEX45Q8NA69 505 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 FZR1Q9UM11 496 aa11.5□□□□□ -0.57
SF1-201ENST00000227503 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 IGLC1P0CG04 106 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 INO80CQ6PI98 192 aaPredicted RBP11.49□□□□□ -0.57
SF1-201ENST00000227503 ACP7Q6ZNF0 438 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 TRIB1Q96RU8 372 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 OR9G1Q8NH87 305 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 PRR7Q8TB68 274 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 DUSP13Q9UII6 198 aa11.49□□□□□ -0.57
SF1-201ENST00000227503 CDX4O14627 284 aaPredicted RBP11.48□□□□□ -0.57
SF1-201ENST00000227503 LEPROTL1O95214 131 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 PRR20EP86478 221 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 PRR20CP86479 221 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 PRR20DP86480 221 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 PRR20BP86481 221 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 PRR20AP86496 221 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 DHRS13Q6UX07 377 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 RAB37Q96AX2 223 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 MBD6Q96DN6 1003 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 ST20Q9HBF5 79 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 ZNF835Q9Y2P0 537 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 GNG7O60262 68 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 PLAUP00749 431 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 WDR82Q6UXN9 313 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 SMIM12Q96EX1 92 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 SCRT2Q9NQ03 307 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 GNG12Q9UBI6 72 aa11.48□□□□□ -0.57
SF1-201ENST00000227503 Q6ZT83 130 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 CXXC4Q9H2H0 198 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 CNOT1A5YKK6 2376 aaKnown RBP11.47□□□□□ -0.57
SF1-201ENST00000227503 ZNF207O43670 478 aaKnown RBP11.47□□□□□ -0.57
SF1-201ENST00000227503 AGFG2O95081 481 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 ZNF134P52741 427 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 C12orf54Q6X4T0 127 aa11.47□□□□□ -0.57
SF1-201ENST00000227503 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.46□□□□□ -0.57
SF1-201ENST00000227503 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 HSBP1L1C9JCN9 74 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 H3BUT2 72 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 WISP2O76076 250 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 IGKV3-15P01624 115 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 ERVK-16P61578 105 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 COX19Q49B96 90 aa11.46□□□□□ -0.57
SF1-201ENST00000227503 BHLHA15Q7RTS1 189 aaPredicted RBP11.46□□□□□ -0.57
SF1-201ENST00000227503 WDR31Q8NA23 367 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms