RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 MED28Q9H204 178 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 GAR1Q9NY12 217 aaKnown RBP18.14■□□□□ 0.49
HOMER3-201ENST00000221222 PSENENQ9NZ42 101 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 STRAPQ9Y3F4 350 aaKnown RBP18.14■□□□□ 0.49
HOMER3-201ENST00000221222 LSM5Q9Y4Y9 91 aaKnown RBP18.14■□□□□ 0.49
HOMER3-201ENST00000221222 PPP5D1E7EU14 171 aa18.13■□□□□ 0.49
HOMER3-201ENST00000221222 GGCTO75223 188 aaKnown RBP18.13■□□□□ 0.49
HOMER3-201ENST00000221222 SPANXN5Q5MJ07 72 aa18.13■□□□□ 0.49
HOMER3-201ENST00000221222 C11orf1Q9H5F2 150 aa18.13■□□□□ 0.49
HOMER3-201ENST00000221222 H3BP45 60 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 TGOLN2O43493 480 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 TSC22D2O75157 780 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 IGHV3-48P01763 117 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 IFNA4P05014 189 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 RPEL1Q2QD12 228 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 SPSB3Q6PJ21 355 aa18.12■□□□□ 0.49
HOMER3-201ENST00000221222 DLX4Q92988 240 aaPredicted RBP18.12■□□□□ 0.49
HOMER3-201ENST00000221222 OR2T8A6NH00 312 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 SLC25A4P12235 298 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 CXCL3P19876 107 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 CD33P20138 364 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 NPBWR1P48145 328 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 S100A10P60903 97 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 CD69Q07108 199 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 KLF5Q13887 457 aaPredicted RBP18.11■□□□□ 0.49
HOMER3-201ENST00000221222 MLANAQ16655 118 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 Q56UQ5 140 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 ETFRF1Q6IPR1 90 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 ACSM6Q6P461 480 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 UBAC2Q8NBM4 344 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 DCUN1D4Q92564 292 aa18.11■□□□□ 0.49
HOMER3-201ENST00000221222 GPX4P36969 197 aaPredicted RBP18.1■□□□□ 0.49
HOMER3-201ENST00000221222 RRAS2P62070 204 aaPredicted RBP18.1■□□□□ 0.49
HOMER3-201ENST00000221222 FCN2Q15485 313 aa18.1■□□□□ 0.49
HOMER3-201ENST00000221222 TMEM14EPQ6UXP3 125 aa18.1■□□□□ 0.49
HOMER3-201ENST00000221222 OR11H7Q8NGC8 314 aa18.1■□□□□ 0.49
HOMER3-201ENST00000221222 OR4X1Q8NH49 305 aa18.1■□□□□ 0.49
HOMER3-201ENST00000221222 MRPL36Q9P0J6 103 aaKnown RBP18.1■□□□□ 0.49
HOMER3-201ENST00000221222 PRSS46E5RG02 174 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 L7N2F9 121 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 CTSGP08311 255 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 PVALBP20472 110 aaPredicted RBP18.09■□□□□ 0.49
HOMER3-201ENST00000221222 VAMP2P63027 116 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 PRSS54Q6PEW0 395 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 SLC16A13Q7RTY0 426 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 GPHB5Q86YW7 130 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 TMEM116Q8NCL8 245 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 CACNG8Q8WXS5 425 aa18.09■□□□□ 0.49
HOMER3-201ENST00000221222 WDR89Q96FK6 387 aaPredicted RBP18.09■□□□□ 0.49
HOMER3-201ENST00000221222 PAIP2BQ9ULR5 123 aaKnown RBP18.09■□□□□ 0.49
HOMER3-201ENST00000221222 GNG7O60262 68 aa18.08■□□□□ 0.49
HOMER3-201ENST00000221222 DEDDO75618 318 aa18.08■□□□□ 0.49
HOMER3-201ENST00000221222 OR2C1O95371 312 aa18.08■□□□□ 0.49
HOMER3-201ENST00000221222 ADMP35318 185 aa18.08■□□□□ 0.49
HOMER3-201ENST00000221222 CHRDL1Q9BU40 450 aa18.08■□□□□ 0.49
HOMER3-201ENST00000221222 ZC4H2Q9NQZ6 224 aa18.08■□□□□ 0.49
HOMER3-201ENST00000221222 PMS2P5A8MQ11 134 aa18.07■□□□□ 0.48
HOMER3-201ENST00000221222 OVOL1O14753 267 aa18.07■□□□□ 0.48
HOMER3-201ENST00000221222 CLN5O75503 358 aa18.07■□□□□ 0.48
HOMER3-201ENST00000221222 C1QL4Q86Z23 238 aa18.07■□□□□ 0.48
HOMER3-201ENST00000221222 PPP1R1CQ8WVI7 109 aa18.07■□□□□ 0.48
HOMER3-201ENST00000221222 RCC1LQ96I51 464 aaKnown RBP18.07■□□□□ 0.48
HOMER3-201ENST00000221222 NUPL2O15504 423 aaKnown RBP18.06■□□□□ 0.48
HOMER3-201ENST00000221222 SYNJ2BPP57105 145 aa18.06■□□□□ 0.48
HOMER3-201ENST00000221222 NOTCH3Q9UM47 2321 aa18.06■□□□□ 0.48
HOMER3-201ENST00000221222 RLN2P04090 185 aa18.05■□□□□ 0.48
HOMER3-201ENST00000221222 RND2P52198 227 aa18.05■□□□□ 0.48
HOMER3-201ENST00000221222 LRRC37A5PQ49AS3 106 aa18.05■□□□□ 0.48
HOMER3-201ENST00000221222 ASB13Q8WXK3 278 aa18.05■□□□□ 0.48
HOMER3-201ENST00000221222 MCRIP2Q9BUT9 160 aaKnown RBP18.05■□□□□ 0.48
HOMER3-201ENST00000221222 ZNF436Q9C0F3 470 aaPredicted RBP18.05■□□□□ 0.48
HOMER3-201ENST00000221222 LYRM2Q9NU23 88 aaPredicted RBP18.05■□□□□ 0.48
HOMER3-201ENST00000221222 TRAV30A0A087WSZ9 112 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 H0YIZ8 118 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 LGALS9O00182 355 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 METTL15P1P0C7V9 234 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 GAMTQ14353 236 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 FAM106AQ4KMX7 169 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 REC114Q7Z4M0 266 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 OR9G4Q8NGQ1 327 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 ZNF414Q96IQ9 312 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 E5RGE8 158 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 MPC2O95563 127 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 PET100P0DJ07 73 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 CAV2P51636 162 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 NPIPB3Q92617 1050 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 SLC35E1Q96K37 410 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 OR5AC2Q9NZP5 309 aa18.04■□□□□ 0.48
HOMER3-201ENST00000221222 NDUFA4O00483 81 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 SCGB2A1O75556 95 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 CCNKO75909 580 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 IGLC1P0CG04 106 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 IGLL1P15814 213 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 BCAP31P51572 246 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 RELQ04864 619 aaPredicted RBP18.03■□□□□ 0.48
HOMER3-201ENST00000221222 OR8G2PQ6IF36 304 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 OR10P1Q8NGE3 313 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 ACY3Q96HD9 319 aa18.03■□□□□ 0.48
HOMER3-201ENST00000221222 PRKDCP78527 4128 aaKnown RBP18.03■□□□□ 0.48
HOMER3-201ENST00000221222 IGHV3-35A0A0C4DH35 117 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms