RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 YLPM1P49750 1951 aaKnown RBP14.01□□□□□ -0.17
USB1-201ENST00000219281 UBE2L3P68036 154 aaKnown RBP14.01□□□□□ -0.17
USB1-201ENST00000219281 C3orf36Q3SXR2 165 aa14.01□□□□□ -0.17
USB1-201ENST00000219281 ZNF833PQ6ZTB9 187 aa14.01□□□□□ -0.17
USB1-201ENST00000219281 MRPL32Q9BYC8 188 aaKnown RBP14.01□□□□□ -0.17
USB1-201ENST00000219281 TANC2Q9HCD6 1990 aa14.01□□□□□ -0.17
USB1-201ENST00000219281 ZNF586Q9NXT0 402 aa14.01□□□□□ -0.17
USB1-201ENST00000219281 A0A1W2PS18 150 aa14□□□□□ -0.17
USB1-201ENST00000219281 PSMB11A5LHX3 300 aa14□□□□□ -0.17
USB1-201ENST00000219281 M0QZK8 103 aa14□□□□□ -0.17
USB1-201ENST00000219281 ZNF253O75346 499 aa14□□□□□ -0.17
USB1-201ENST00000219281 ZNF25P17030 456 aaPredicted RBP14□□□□□ -0.17
USB1-201ENST00000219281 PMCHP20382 165 aa14□□□□□ -0.17
USB1-201ENST00000219281 REG1BP48304 166 aa14□□□□□ -0.17
USB1-201ENST00000219281 AMTP48728 403 aa14□□□□□ -0.17
USB1-201ENST00000219281 ERHP84090 104 aaKnown RBP14□□□□□ -0.17
USB1-201ENST00000219281 FAM27E3Q08E93 113 aa14□□□□□ -0.17
USB1-201ENST00000219281 COX19Q49B96 90 aa14□□□□□ -0.17
USB1-201ENST00000219281 C1orf185Q5T7R7 199 aa14□□□□□ -0.17
USB1-201ENST00000219281 FAM168AQ92567 244 aa14□□□□□ -0.17
USB1-201ENST00000219281 KCNS1Q96KK3 526 aa14□□□□□ -0.17
USB1-201ENST00000219281 DNAJC4Q9NNZ3 241 aa14□□□□□ -0.17
USB1-201ENST00000219281 NRN1Q9NPD7 142 aa14□□□□□ -0.17
USB1-201ENST00000219281 CDC42EP3Q9UKI2 254 aa14□□□□□ -0.17
USB1-201ENST00000219281 BMPR1BO00238 502 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 APOA2P02652 100 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 RPL8P62917 257 aaKnown RBP13.99□□□□□ -0.17
USB1-201ENST00000219281 CCL8P80075 99 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 TMEM30BQ3MIR4 351 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 OSR1Q8TAX0 266 aaPredicted RBP13.99□□□□□ -0.17
USB1-201ENST00000219281 SSBP3Q9BWW4 388 aaPredicted RBP13.99□□□□□ -0.17
USB1-201ENST00000219281 LINC00312Q9Y6C7 94 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 DIRC3C9JPN6 131 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 CRYABP02511 175 aaKnown RBP13.99□□□□□ -0.17
USB1-201ENST00000219281 PYYP10082 97 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 CCL3L1P16619 93 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 CASP6P55212 293 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 TEX36Q5VZQ5 186 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 Q8N976 141 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 CACNG8Q8WXS5 425 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 ABHD17AQ96GS6 310 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 ICE1Q9Y2F5 2266 aa13.99□□□□□ -0.17
USB1-201ENST00000219281 IZUMO1RA6ND01 250 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 H0YJW9 148 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 IGHV3-48P01763 117 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 HLA-DQA1P01909 254 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 SSUH2Q9Y2M2 353 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 PIEZO2Q9H5I5 2752 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 A6NNC1 897 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 APCSP02743 223 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 RPLP1P05386 114 aaKnown RBP13.98□□□□□ -0.17
USB1-201ENST00000219281 CD40P25942 277 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 CEACAM8P31997 349 aaPredicted RBP13.98□□□□□ -0.17
USB1-201ENST00000219281 ZNF714Q96N38 554 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 GAL3ST2Q9H3Q3 398 aa13.98□□□□□ -0.17
USB1-201ENST00000219281 SMG1Q96Q15 3661 aaKnown RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 COX7A2P2O60397 106 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 USF1P22415 310 aaPredicted RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 FLYWCH2Q96CP2 140 aaKnown RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 RNF2Q99496 336 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 ZNF355PQ9NSJ1 428 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 TRAV34A0A0B4J273 112 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 NKX6-3A6NJ46 265 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 C10orf55Q5SWW7 151 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 MRPL52Q86TS9 123 aaKnown RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 ZCCHC24Q8N2G6 241 aaKnown RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 FAM57AQ8TBR7 257 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 NPIPB3Q92617 1050 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 PAXXQ9BUH6 204 aa13.97□□□□□ -0.17
USB1-201ENST00000219281 FNDC4Q9H6D8 234 aaPredicted RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 ZNF331Q9NQX6 463 aaPredicted RBP13.97□□□□□ -0.17
USB1-201ENST00000219281 WT1-ASQ06250 92 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 DIAPH2-AS1Q14236 149 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 BATFQ16520 125 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 TMEM177Q53S58 311 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 C10orf113Q5VZT2 155 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 PATE2Q6UY27 113 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 FAM19A2Q8N3H0 131 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 OR5AN1Q8NGI8 311 aa13.96□□□□□ -0.17
USB1-201ENST00000219281 CGB1A6NKQ9 187 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 ZNF324O75467 553 aaPredicted RBP13.95□□□□□ -0.18
USB1-201ENST00000219281 SLAQ13239 276 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 ZNF329Q86UD4 541 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 OR4B1Q8NGF8 309 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 A0A1W2PN81 502 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 TSKUQ8WUA8 353 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 TMEM68Q96MH6 324 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 COL25A1Q9BXS0 654 aaPredicted RBP13.95□□□□□ -0.18
USB1-201ENST00000219281 ZNF430Q9H8G1 570 aaPredicted RBP13.95□□□□□ -0.18
USB1-201ENST00000219281 CEP295Q9C0D2 2601 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 DYSFO75923 2080 aa13.95□□□□□ -0.18
USB1-201ENST00000219281 FCN3O75636 299 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 FOXC1Q12948 553 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 TMEM200BQ69YZ2 307 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 NIT1Q86X76 327 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 OR1L4Q8NGR5 311 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 PEX7O00628 323 aa13.94□□□□□ -0.18
USB1-201ENST00000219281 MEF2CQ06413 473 aaPredicted RBP13.94□□□□□ -0.18
USB1-201ENST00000219281 SPATA45Q537H7 98 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms