RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 YTHDF2Q9Y5A9 579 aaKnown RBP23.69■■□□□ 1.38
PABPN1-201ENST00000216727 Q8WTZ3 238 aa23.68■■□□□ 1.38
PABPN1-201ENST00000216727 EAF1Q96JC9 268 aaPredicted RBP23.68■■□□□ 1.38
PABPN1-201ENST00000216727 CTRB1P17538 263 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 CTRB2Q6GPI1 263 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 TMEM116Q8NCL8 245 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 SLC25A33Q9BSK2 321 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 DNAJC4Q9NNZ3 241 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 IGHV4-39P01824 125 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 SSX2Q16385 188 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 ZNF343Q6P1L6 599 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 C22orf15Q8WYQ4 148 aa23.67■■□□□ 1.38
PABPN1-201ENST00000216727 A0A1W2PRD5 423 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 A0A1W2PRF3 423 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 A0A1W2PRM7 423 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 NDUFB4O95168 129 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 IGHV3-48P01763 117 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 OR2T10Q8NGZ9 312 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 PFDN5Q99471 154 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 TSPAN9O75954 239 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 C8orf88P0DMB2 117 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 APELAP0DMC3 54 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 KIAA0141Q14154 515 aaPredicted RBP23.66■■□□□ 1.38
PABPN1-201ENST00000216727 C1QL4Q86Z23 238 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 OR1L4Q8NGR5 311 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 ZNF503Q96F45 646 aa23.66■■□□□ 1.38
PABPN1-201ENST00000216727 LGALS4P56470 323 aa23.65■■□□□ 1.38
PABPN1-201ENST00000216727 ZNF90Q03938 601 aa23.65■■□□□ 1.38
PABPN1-201ENST00000216727 ZFP82Q8N141 532 aa23.65■■□□□ 1.38
PABPN1-201ENST00000216727 URGCP-MRPS24S4R325 110 aa23.65■■□□□ 1.38
PABPN1-201ENST00000216727 PDLIM4P50479 330 aa23.64■■□□□ 1.38
PABPN1-201ENST00000216727 TRGV9Q99603 122 aa23.64■■□□□ 1.38
PABPN1-201ENST00000216727 BIN3Q9NQY0 253 aa23.64■■□□□ 1.38
PABPN1-201ENST00000216727 TBL2Q9Y4P3 447 aaKnown RBP23.64■■□□□ 1.38
PABPN1-201ENST00000216727 TOX4O94842 621 aa23.64■■□□□ 1.37
PABPN1-201ENST00000216727 CNIH1O95406 144 aa23.64■■□□□ 1.37
PABPN1-201ENST00000216727 SMUG1Q53HV7 270 aa23.64■■□□□ 1.37
PABPN1-201ENST00000216727 C19orf35Q6ZS72 473 aa23.64■■□□□ 1.37
PABPN1-201ENST00000216727 DOPEY1Q5JWR5 2465 aa23.63■■□□□ 1.37
PABPN1-201ENST00000216727 EBI3Q14213 229 aa23.63■■□□□ 1.37
PABPN1-201ENST00000216727 DYNAPQ8N1N2 210 aa23.63■■□□□ 1.37
PABPN1-201ENST00000216727 TNFRSF19Q9NS68 423 aa23.63■■□□□ 1.37
PABPN1-201ENST00000216727 DMRT1Q9Y5R6 373 aa23.63■■□□□ 1.37
PABPN1-201ENST00000216727 CXCL1P09341 107 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 UBE2E1P51965 193 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 BPIFB3P59826 476 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 HES1Q14469 280 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 C5orf64Q2M2E5 130 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 C2CD4CQ8TF44 421 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 C11orf52Q96A22 123 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 COX7A2P2O60397 106 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 OR7C2O60412 319 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 UHRF2Q96PU4 802 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 TBX15Q96SF7 602 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 DERL1Q9BUN8 251 aa23.62■■□□□ 1.37
PABPN1-201ENST00000216727 SCO2A0A1W2PP80 73 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 CD24P25063 80 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 C10orf113Q5VZT2 155 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 RUSC1-AS1Q66K80 236 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 Q8N6K4 173 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 OR4X1Q8NH49 305 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 FAM167A-AS1Q96KT0 104 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 AKAP6Q13023 2319 aa23.61■■□□□ 1.37
PABPN1-201ENST00000216727 LINC01551Q86U37 167 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 ANAPC16Q96DE5 110 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 SSX3Q99909 188 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 POLR3KQ9Y2Y1 108 aaPredicted RBP23.6■■□□□ 1.37
PABPN1-201ENST00000216727 KLF2Q9Y5W3 355 aaPredicted RBP23.6■■□□□ 1.37
PABPN1-201ENST00000216727 TGIF2-C20orf24A0A0A6YYL0 155 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 PATE2Q6UY27 113 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 C16orf82Q7Z2V1 217 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 CCL19Q99731 98 aa23.6■■□□□ 1.37
PABPN1-201ENST00000216727 USP24Q9UPU5 2620 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 SPTAN1Q13813 2472 aaKnown RBP23.59■■□□□ 1.37
PABPN1-201ENST00000216727 ELOA3CA0A087WX78 387 aaPredicted RBP23.59■■□□□ 1.37
PABPN1-201ENST00000216727 FXYD3Q14802 87 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 FBLN7Q53RD9 439 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 SLC25A2Q9BXI2 301 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 WNT10AQ9GZT5 417 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 SAV1Q9H4B6 383 aaPredicted RBP23.59■■□□□ 1.37
PABPN1-201ENST00000216727 RPS10P46783 165 aaKnown RBP23.59■■□□□ 1.37
PABPN1-201ENST00000216727 OR1L6Q8NGR2 347 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 SPOCK3Q9BQ16 436 aa23.59■■□□□ 1.37
PABPN1-201ENST00000216727 WNK2Q9Y3S1 2297 aa23.58■■□□□ 1.37
PABPN1-201ENST00000216727 I3L2K1 104 aa23.58■■□□□ 1.37
PABPN1-201ENST00000216727 CACNA1BQ00975 2339 aa23.58■■□□□ 1.37
PABPN1-201ENST00000216727 TRBV24-1A0A075B6N3 115 aa23.57■■□□□ 1.36
PABPN1-201ENST00000216727 MORN5Q5VZ52 161 aa23.57■■□□□ 1.36
PABPN1-201ENST00000216727 A0A1W2PRE2 83 aa23.57■■□□□ 1.36
PABPN1-201ENST00000216727 H7BYZ3 331 aa23.57■■□□□ 1.36
PABPN1-201ENST00000216727 ZNF562Q6V9R5 426 aa23.57■■□□□ 1.36
PABPN1-201ENST00000216727 CD99P14209 185 aa23.56■■□□□ 1.36
PABPN1-201ENST00000216727 LPAR2Q9HBW0 351 aa23.56■■□□□ 1.36
PABPN1-201ENST00000216727 ZNF355PQ9NSJ1 428 aa23.56■■□□□ 1.36
PABPN1-201ENST00000216727 TRBV20OR9-2A0A075B6H5 130 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 OR5AU1Q8NGC0 362 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 FAM210BQ96KR6 192 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 MED13LQ71F56 2210 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 TRAV5A0A0B4J249 113 aa23.55■■□□□ 1.36
PABPN1-201ENST00000216727 PFN1P07737 140 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms