RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
MBD3-201ENST00000156825 TMEM262E9PQX1 116 aa15.65■□□□□ 0.1
MBD3-201ENST00000156825 ATG101Q9BSB4 218 aa15.65■□□□□ 0.1
MBD3-201ENST00000156825 TMEM160Q9NX00 188 aa15.65■□□□□ 0.1
MBD3-201ENST00000156825 LDLRAD4O15165 306 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 ZNF672Q499Z4 452 aaPredicted RBP15.64■□□□□ 0.09
MBD3-201ENST00000156825 A0A0G2JLM5 398 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 C1QTNF9P0C862 333 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 SRD5A1P18405 259 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 PMCHL1Q16048 86 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 TRAV8-6A0A0B4J262 113 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 FAM71F2Q6NXP2 309 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 CACNG8Q8WXS5 425 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 VSIRQ9H7M9 311 aa15.64■□□□□ 0.09
MBD3-201ENST00000156825 NAPSAO96009 420 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 VENTXO95231 258 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 SLC25A34Q6PIV7 304 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 WFDC1Q9HC57 220 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 RNASE4P34096 147 aaKnown RBP15.63■□□□□ 0.09
MBD3-201ENST00000156825 KLRD1Q13241 179 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 TCF23Q7RTU1 214 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 BMPERQ8N8U9 685 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
MBD3-201ENST00000156825 COL25A1Q9BXS0 654 aaPredicted RBP15.63■□□□□ 0.09
MBD3-201ENST00000156825 MLNRO43193 412 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 PPIFP30405 207 aaKnown RBP15.63■□□□□ 0.09
MBD3-201ENST00000156825 RHOGP84095 191 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 TMEM219Q86XT9 240 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 ST6GALNAC6Q969X2 333 aa15.63■□□□□ 0.09
MBD3-201ENST00000156825 ID3Q02535 119 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 PRR31Q5SQ13 230 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 PRELID3AQ96N28 172 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 PLSCR4Q9NRQ2 329 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 HTN3P15516 51 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 IL36BQ9NZH7 164 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 RFNGQ9Y644 331 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 SRRM5B3KS81 715 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 SSBP4Q9BWG4 385 aaPredicted RBP15.62■□□□□ 0.09
MBD3-201ENST00000156825 GEMIN7Q9H840 131 aaKnown RBP15.62■□□□□ 0.09
MBD3-201ENST00000156825 DDTP30046 118 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 ADIPOQQ15848 244 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 TUBA4BQ9H853 241 aa15.62■□□□□ 0.09
MBD3-201ENST00000156825 A8MXK9 166 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 LGALS3P17931 250 aaKnown RBP15.61■□□□□ 0.09
MBD3-201ENST00000156825 MEIG1Q5JSS6 88 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 TMEM170BQ5T4T1 132 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 UQCR10Q9UDW1 63 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 A0A1B0GUT8 65 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 REC114Q7Z4M0 266 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 DUX3Q96PT4 197 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 BEX4Q9NWD9 120 aaPredicted RBP15.61■□□□□ 0.09
MBD3-201ENST00000156825 APOHP02749 345 aaPredicted RBP15.61■□□□□ 0.09
MBD3-201ENST00000156825 C14orf144Q96I85 54 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 SDF2L1Q9HCN8 221 aa15.61■□□□□ 0.09
MBD3-201ENST00000156825 PNRC2Q9NPJ4 139 aaKnown RBP15.61■□□□□ 0.09
MBD3-201ENST00000156825 HIGD1CA8MV81 97 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 CD33P20138 364 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 SUMO2P61956 95 aaKnown RBP15.6■□□□□ 0.09
MBD3-201ENST00000156825 RPL23P62829 140 aaKnown RBP15.6■□□□□ 0.09
MBD3-201ENST00000156825 C21orf62-AS1Q17RA5 79 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 OR4X2Q8NGF9 303 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 TRAV5A0A0B4J249 113 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 ASIPP42127 132 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 CARHSP1Q9Y2V2 147 aaKnown RBP15.6■□□□□ 0.09
MBD3-201ENST00000156825 GAGE10A6NGK3 116 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 TIMP3P35625 211 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 CD177Q8N6Q3 437 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 RNF125Q96EQ8 232 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 MYOD1P15172 320 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 LBHQ53QV2 105 aaPredicted RBP15.6■□□□□ 0.09
MBD3-201ENST00000156825 FBLN7Q53RD9 439 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 ACACBO00763 2458 aa15.6■□□□□ 0.09
MBD3-201ENST00000156825 SUPT4H1P63272 117 aaKnown RBP15.6■□□□□ 0.09
MBD3-201ENST00000156825 GNLYP22749 145 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 KLF17Q5JT82 389 aaPredicted RBP15.59■□□□□ 0.09
MBD3-201ENST00000156825 A0A0G2JNJ9 132 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 Q9UFV3 132 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 TBL2Q9Y4P3 447 aaKnown RBP15.59■□□□□ 0.09
MBD3-201ENST00000156825 DPRXA6NFQ7 191 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 SMAGPQ0VAQ4 97 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 MDS2Q8NDY4 140 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 NEUROG1Q92886 237 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 RPP21Q9H633 154 aaKnown RBP15.59■□□□□ 0.09
MBD3-201ENST00000156825 RPUSD1Q9UJJ7 312 aaKnown RBP15.59■□□□□ 0.09
MBD3-201ENST00000156825 SLC25A15Q9Y619 301 aa15.59■□□□□ 0.09
MBD3-201ENST00000156825 CA1P00915 261 aaPredicted RBP15.58■□□□□ 0.09
MBD3-201ENST00000156825 FAM209BQ5JX69 171 aa15.58■□□□□ 0.09
MBD3-201ENST00000156825 DPH3Q96FX2 82 aa15.58■□□□□ 0.09
MBD3-201ENST00000156825 PMCHL2Q9BQD1 86 aa15.58■□□□□ 0.09
MBD3-201ENST00000156825 ZNF256Q9Y2P7 627 aaPredicted RBP15.58■□□□□ 0.09
MBD3-201ENST00000156825 TRAV3A0A0B4J244 114 aa15.58■□□□□ 0.08
MBD3-201ENST00000156825 BRD3OSQ6XYD6 125 aa15.58■□□□□ 0.08
MBD3-201ENST00000156825 PPP1R17O96001 155 aa15.58■□□□□ 0.08
MBD3-201ENST00000156825 NUTF2P61970 127 aaKnown RBP15.58■□□□□ 0.08
MBD3-201ENST00000156825 TMEM200BQ69YZ2 307 aa15.58■□□□□ 0.08
MBD3-201ENST00000156825 ZNF414Q96IQ9 312 aa15.58■□□□□ 0.08
MBD3-201ENST00000156825 LINC01587Q99440 93 aa15.58■□□□□ 0.08
MBD3-201ENST00000156825 MOB4Q9Y3A3 225 aa15.57■□□□□ 0.08
MBD3-201ENST00000156825 WISP1O95388 367 aa15.57■□□□□ 0.08
MBD3-201ENST00000156825 TMEM183AQ8IXX5 376 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms