RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 COL6A6A6NMZ7 2263 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 ELOA3CA0A087WX78 387 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-201ENST00000054666 TRGC1P0CF51 173 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 CNTFRP26992 372 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 S100A2P29034 98 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 GPR6P46095 362 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-201ENST00000054666 ARF6P62330 175 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 TPTE2P1Q5T6R2 138 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 HCP5Q6MZN7 132 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 OR1P1Q8NH06 330 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 OR4X1Q8NH49 305 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 IMMP2LQ96T52 175 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 PYGO2Q9BRQ0 406 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 SLC25A33Q9BSK2 321 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 AURKAIP1Q9NWT8 199 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-201ENST00000054666 DPM3Q9P2X0 92 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 LY96Q9Y6Y9 160 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 NAV3Q8IVL0 2385 aa6.64□□□□□ -1.35
VAMP3-201ENST00000054666 A0A1W2PRE2 83 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 PGPEP1LA6NFU8 196 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 TIMM23O14925 209 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 GGCTO75223 188 aaKnown RBP6.63□□□□□ -1.35
VAMP3-201ENST00000054666 CRYGBP07316 175 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 OR10J4P0C629 311 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 HOXA5P20719 270 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 HNF1AP20823 631 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 CDX1P47902 265 aaPredicted RBP6.63□□□□□ -1.35
VAMP3-201ENST00000054666 LCN2P80188 198 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 MMDQ15546 238 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 C4orf17Q53FE4 359 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 OR5AU1Q8NGC0 362 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 TMEM37Q8WXS4 190 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 FRZBQ92765 325 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 FBXL15Q9H469 300 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 TNFRSF19Q9NS68 423 aa6.63□□□□□ -1.35
VAMP3-201ENST00000054666 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 MOSP00540 346 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 ATRXP46100 2492 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 GNG4P50150 75 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 SSBP2P81877 361 aaPredicted RBP6.62□□□□□ -1.35
VAMP3-201ENST00000054666 CLEC12BQ2HXU8 276 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 MRGPRG-AS1Q2M3A8 158 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 OR11H6Q8NGC7 330 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 OR10G8Q8NGN5 311 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 SRSF12Q8WXF0 261 aaKnown RBP6.62□□□□□ -1.35
VAMP3-201ENST00000054666 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
VAMP3-201ENST00000054666 UBTD1Q9HAC8 227 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 ZNF355PQ9NSJ1 428 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 F11RQ9Y624 299 aaKnown RBP6.62□□□□□ -1.35
VAMP3-201ENST00000054666 PSMB11A5LHX3 300 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 LY6LH3BQJ8 138 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 CNIH1O95406 144 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 TYMSP04818 313 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 APELAP0DMC3 54 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 CRYBB3P26998 211 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 ZNF90Q03938 601 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 CENPWQ5EE01 88 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 TEX38Q6PEX7 206 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 ZNF503Q96F45 646 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 PERPQ96FX8 193 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 TRGV9Q99603 122 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 PAXXQ9BUH6 204 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 SLC25A2Q9BXI2 301 aa6.62□□□□□ -1.35
VAMP3-201ENST00000054666 GAR1Q9NY12 217 aaKnown RBP6.62□□□□□ -1.35
VAMP3-201ENST00000054666 IGKV1D-37A0A075B6S9 117 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 A0A0U1RQK1 487 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 HELTA6NFD8 242 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 GGTLC3B5MD39 225 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 NBR2O15453 112 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 CRYGCP07315 174 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 PRTN3P24158 256 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 CDKN1AP38936 164 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 PAX2Q02962 417 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 SSX2Q16385 188 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 TIGITQ495A1 244 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 PVRIGQ6DKI7 326 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 KIR3DL3Q8N743 410 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 STXBP6Q8NFX7 210 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 SGMS2Q8NHU3 365 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 OCC1Q8TAD7 63 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-201ENST00000054666 PITPNC1Q9UKF7 332 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 HILPDAQ9Y5L2 63 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 ZNF320A2RRD8 509 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 TEX22C9J3V5 150 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
VAMP3-201ENST00000054666 FOXL1Q12952 345 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 KLRD1Q13241 179 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 HES1Q14469 280 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 LINC00305Q7Z4B0 112 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 TMEM116Q8NCL8 245 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 OR1B1Q8NGR6 318 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 FAM167A-AS1Q96KT0 104 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 OR51M1Q9H341 326 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 MRPL36Q9P0J6 103 aaKnown RBP6.61□□□□□ -1.35
VAMP3-201ENST00000054666 SPTBN4Q9H254 2564 aa6.61□□□□□ -1.35
VAMP3-201ENST00000054666 PLXNB1O43157 2135 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms