RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SAA4P35542 130 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 SNRPEP62304 92 aaKnown RBP8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 PLAURQ03405 335 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 LEMD1Q68G75 181 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 C3orf56Q8N813 242 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 TTC28Q96AY4 2481 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 SAP30O75446 220 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 CENPWQ5EE01 88 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 COQ2Q96H96 371 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 PEX7O00628 323 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 LDLRAD4O15165 306 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 PARLQ9H300 379 aa8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 MBNL3Q9NUK0 354 aaKnown RBP8.52□□□□□ -1.05
NIPAL3-201ENST00000003912 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 ZNF585BQ52M93 769 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 SPSB3Q6PJ21 355 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 VOPP1Q96AW1 172 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 SDF2L1Q9HCN8 221 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 OTORQ9NRC9 128 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 H0YJW9 148 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 J3QLI3 93 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 RPL29P47914 159 aaKnown RBP8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 UBE2E1P51965 193 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 RARRES2Q99969 163 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 ZFHX2Q9C0A1 2572 aaPredicted RBP8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 UQCRFS1P47985 274 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 MIR17HGQ75NE6 70 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 USMG5Q96IX5 58 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 Q9H3A6 140 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 IGLV1-44P01699 117 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 AGAP20933 346 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 FHL1Q13642 323 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 OR11H4Q8NGC9 324 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 GPR61Q9BZJ8 451 aa8.51□□□□□ -1.05
NIPAL3-201ENST00000003912 NUDT3O95989 172 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 PLA2G5P39877 138 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 Q5BKY6 102 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 MPTX1A8MV57 137 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 RNASE4P34096 147 aaKnown RBP8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 BEX4Q9NWD9 120 aaPredicted RBP8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 TRGV2A0A075B6R0 118 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 FHITP49789 147 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 ID3Q02535 119 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 LRTM2Q8N967 370 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 RNF151Q2KHN1 245 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 LYRM7Q5U5X0 104 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 C12orf54Q6X4T0 127 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 ASCL4Q6XD76 172 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 CIARTQ8N365 385 aaPredicted RBP8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 NBASA2RRP1 2371 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 PPP1R17O96001 155 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 OR10W1Q8NGF6 305 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
NIPAL3-201ENST00000003912 ABCA4P78363 2273 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 TRAV34A0A0B4J273 112 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 VENTXO95231 258 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 EMP1P54849 157 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 BEND2Q8NDZ0 799 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 K7EM74 188 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 WISP1O95388 367 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 CD33P20138 364 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 SFRP2Q96HF1 295 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 IGHV1-69DA0A0B4J2H0 117 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 IGHV2-70DA0A0C4DH43 119 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 M0R381 172 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 CRXO43186 299 aaPredicted RBP8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 IGHV1-69P01742 117 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 CR1LQ2VPA4 569 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 C10orf55Q5SWW7 151 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 SPTBN1Q01082 2364 aaKnown RBP8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 CD55P08174 381 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 HTN3P15516 51 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 SIGLEC15Q6ZMC9 328 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 Q6ZS49 121 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 ZFP30Q9Y2G7 519 aa8.49□□□□□ -1.05
NIPAL3-201ENST00000003912 FAM223BA6NKX1 122 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 LHFPL1Q86WI0 220 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 FAM223AQ8IWN6 122 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 MAPK1IP1LQ8NDC0 245 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 NEU1Q99519 415 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 ITGB1BP1O14713 200 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 COTL1Q14019 142 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 KLHL30-AS1Q8NEE0 82 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 OR1N2Q8NGR9 330 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 ASCL2Q99929 193 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 SIGLEC9Q9Y336 463 aa8.48□□□□□ -1.05
NIPAL3-201ENST00000003912 KLF2Q9Y5W3 355 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms