RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Slamf7Q8BHK6 333 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Defb21Q8C5Z4 100 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ca15Q99N23 324 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 RetnlaQ9EP95 111 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Shroom3Q9QXN0 1986 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tmem238lA0A1B0GS74 79 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm6993A0A1W2P738 69 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 MscO88940 201 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ms4a13Q5FWC3 203 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Taar4Q5QD15 347 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 CebpeQ6PZD9 281 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr127Q8VF25 323 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ufc1Q9CR09 167 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tex37Q9DAG4 180 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Q9DAL9 119 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Mad2l1bpQ9DCX1 276 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr972Q9EQA2 314 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Srsf10Q9R0U0 262 aaKnown RBP12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Samt1A2BED8 237 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Hoxa6P09092 232 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Faap20Q3UN58 186 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Dirc2Q8BFQ6 478 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr922Q8VG50 311 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1293-psA0A1L1SVB5 326 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1214A2ATG3 311 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm12886B1AZM5 119 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 BatfO35284 125 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Dnd1Q6VY05 352 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Lrtm1Q8BXQ3 356 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ighv9-4A0A0A6YWH6 117 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Fabp4P04117 132 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Trat1Q3UU67 187 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Cbln2Q8BGU2 224 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Rhbdd1Q8BHC7 315 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Znf524Q9D0B1 321 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tmem116A0A0G2JGD3 401 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1104A2AVB5 310 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Lrrc3bQ8VCH9 259 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Plxnb2B2RXS4 1842 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prob1A0A087WR45 1010 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 G6pcP35576 357 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Spatc1Q148B6 480 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 TifabQ8JZM6 147 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 GhitmQ91VC9 346 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ms4a3Q920C4 213 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Asb5Q9D1A4 329 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ttc3O88196 1979 aaKnown RBP12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Trav17A0A075B655 113 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Oxgr1Q6IYF8 337 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gltpd2Q8K0R6 321 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Cd226Q8K4F0 333 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Masp2Q91WP0 685 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prss21Q9JHJ7 324 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Igsf11P0C673 428 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tceal8Q9CZY2 117 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 5530401A14RikQ9D3H9 131 aa12.85□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Lamb2Q61292 1799 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Igkv1-131A0A140T8M8 120 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 H60bB1B212 251 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Col8a1Q00780 744 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 EcscrQ3TZW0 214 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Higd1cQ76I25 96 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 B430218F22RikQ8BQR5 223 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gpr4Q8BUD0 365 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Znf385aQ8VD12 386 aaKnown RBP12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1272Q8VGN8 308 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Josd1Q9DBJ6 202 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 OsmP53347 263 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 SelenotP62342 195 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ear1P97426 155 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Nkx3-1P97436 237 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Q3UZV7 1028 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm20816Q5FWD4 227 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Zfp954Q7TNU5 416 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Stxbp6Q8R3T5 210 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Cthrc1Q9D1D6 245 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ighv14-3A0A075B5R9 117 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm6904E9PVF1 202 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 A630023A22RikJ3QP60 199 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Cxcl10P17515 98 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Zfp386Q1WWJ5 626 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1448Q8VFX1 314 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm15440D3Z3P4 90 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm4133K9J7G6 307 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr905L7N1X5 310 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Klk15Q8CGR4 254 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Lrrc10Q8K3W2 274 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr490Q8VFD2 314 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr829Q8VGX1 321 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr577Q8VH11 312 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Zmat5Q9CQR5 170 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gab2Q9Z1S8 665 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 PdfS4R2K0 231 aa12.84□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prss47A0A0N4SVQ0 395 aa12.83□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Rag2P21784 527 aa12.83□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Zdhhc23Q5Y5T3 425 aa12.83□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 SepsecsQ6P6M7 504 aa12.83□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ndufa2Q9CQ75 99 aa12.83□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 HikeshiQ9DD02 197 aa12.83□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Dnajb12Q9QYI4 376 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms