RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 LYPD6BQ8NI32 183 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 SSX3Q99909 188 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 RPRMQ9NS64 109 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 MRPL36Q9P0J6 103 aaKnown RBP13.92□□□□□ -0.18
PHGDH-232ENST00000641947 UMAD1C9J7I0 102 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 TRIM77I1YAP6 450 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 IGHV3-48P01763 117 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 EGR2P11161 476 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-232ENST00000641947 BLOC1S1P78537 153 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 ZNF562Q6V9R5 426 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 OR2T6Q8NHC8 308 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 NPVFQ9HCQ7 196 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 HLA-DRB1P01911 266 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 RAB2AP61019 212 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 ZNF726P1Q15940 193 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 AKR1C8PQ5T2L2 129 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 SLC16A13Q7RTY0 426 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 ABHD5Q8WTS1 349 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 GGTLC1Q9BX51 225 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 FAM96BQ9Y3D0 163 aa13.91□□□□□ -0.18
PHGDH-232ENST00000641947 F11RQ9Y624 299 aaKnown RBP13.91□□□□□ -0.18
PHGDH-232ENST00000641947 FNDC10F2Z333 226 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 EIF3GO75821 320 aaKnown RBP eCLIP13.9□□□□□ -0.18
PHGDH-232ENST00000641947 FBP1P09467 338 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 CTRB1P17538 263 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 SERF2P84101 59 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 AKR1C1Q04828 323 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 C5orf56Q8N8D9 126 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 OR1P1Q8NH06 330 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 RNASEH2CQ8TDP1 164 aaKnown RBP13.9□□□□□ -0.18
PHGDH-232ENST00000641947 C22orf15Q8WYQ4 148 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 RBM14Q96PK6 669 aaKnown RBP13.9□□□□□ -0.18
PHGDH-232ENST00000641947 FOXC2Q99958 501 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 SLC25A33Q9BSK2 321 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 C1RLQ9NZP8 487 aa13.9□□□□□ -0.18
PHGDH-232ENST00000641947 A0A1B0GV50 99 aa13.89□□□□□ -0.19
PHGDH-232ENST00000641947 H3BUX3 64 aa13.89□□□□□ -0.19
PHGDH-232ENST00000641947 AMY1AP04745 511 aa13.89□□□□□ -0.19
PHGDH-232ENST00000641947 DEFA4P12838 97 aa13.89□□□□□ -0.19
PHGDH-232ENST00000641947 SUB1P53999 127 aaKnown RBP eCLIP13.89□□□□□ -0.19
PHGDH-232ENST00000641947 SPSB3Q6PJ21 355 aa13.89□□□□□ -0.19
PHGDH-232ENST00000641947 HSD17B13Q7Z5P4 300 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-232ENST00000641947 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
PHGDH-232ENST00000641947 ANKRD34BA5PLL1 514 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 SMAD7O15105 426 aaKnown RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 AGPAT2O15120 278 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 MPDU1O75352 247 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 GPX4P36969 197 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 OPRK1P41145 380 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 SRSF3P84103 164 aaKnown RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 LY6EQ16553 131 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 GCSAMLQ5JQS6 135 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 FFAR4Q5NUL3 377 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 CYB5R2Q6BCY4 276 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 TEPPQ6URK8 271 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 MRPL41Q8IXM3 137 aaKnown RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 MISP3Q96FF7 219 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 RASL11BQ9BPW5 248 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 IGHV3-21A0A0B4J1V1 117 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 LINC01548A6NM66 108 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 YIF1AO95070 293 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 DEFB112Q30KQ8 113 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 TMEM41BQ5BJD5 291 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 MIC13Q5XKP0 118 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 TMEM144Q7Z5S9 345 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 RPP25LQ8N5L8 163 aaKnown RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 EIF4E3Q8N5X7 224 aaKnown RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 MARC2Q969Z3 335 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 RCC1LQ96I51 464 aaKnown RBP13.88□□□□□ -0.19
PHGDH-232ENST00000641947 WNT10AQ9GZT5 417 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 MYO9AB2RTY4 2548 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 ACANP16112 2415 aa13.88□□□□□ -0.19
PHGDH-232ENST00000641947 A6NDX4 124 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 CRYGCP07315 174 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 CCL20P78556 96 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 ZNF709Q8N972 641 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 CACNG8Q8WXS5 425 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 ACY3Q96HD9 319 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 MOB4Q9Y3A3 225 aa13.87□□□□□ -0.19
PHGDH-232ENST00000641947 C17orf112F2Z3M2 114 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 S100A1P23297 94 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 LFNGQ8NES3 379 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 PXMP4Q9Y6I8 212 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 OTOGQ6ZRI0 2925 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 IGKV1D-37A0A075B6S9 117 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 KRTAP1-1Q07627 177 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 IL34Q6ZMJ4 242 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 SLC35E1Q96K37 410 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 SCRT1Q9BWW7 348 aa13.86□□□□□ -0.19
PHGDH-232ENST00000641947 NPIPB5A8MRT5 1133 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 I3L2K1 104 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 I3L521 148 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 TSPAN15O95858 294 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 MT-CO2P00403 227 aa13.85□□□□□ -0.19
PHGDH-232ENST00000641947 H2AFB1P0C5Y9 115 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms