RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CRYGBP07316 175 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 FGF2P09038 288 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 PET100P0DJ07 73 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 MYOD1P15172 320 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 PPIFP30405 207 aaKnown RBP7.71□□□□□ -1.18
PHGDH-222ENST00000641587 TNFRSF9Q07011 255 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 FGL1Q08830 312 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 RAB32Q13637 225 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 ZNF429Q86V71 674 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 GRPEL2Q8TAA5 225 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 PPP1R1CQ8WVI7 109 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 ARPC1AQ92747 370 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 ST6GAL2Q96JF0 529 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 UBE2E2Q96LR5 201 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 KRTAP17-1Q9BYP8 105 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 TMEM14BQ9NUH8 114 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 RCL1Q9Y2P8 373 aaKnown RBP7.71□□□□□ -1.18
PHGDH-222ENST00000641587 FXYD6-FXYD2A0A087WZ82 144 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 FAM90A26D6RGX4 464 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 K7EPK0 472 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 L7N2F9 121 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 PITX3O75364 302 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 IAPPP10997 89 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 PVALBP20472 110 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-222ENST00000641587 PSMB6P28072 239 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 MAS1LP35410 378 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 RPL27AP46776 148 aaKnown RBP7.7□□□□□ -1.18
PHGDH-222ENST00000641587 SPCS3P61009 180 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 POLR2GP62487 172 aaKnown RBP eCLIP7.7□□□□□ -1.18
PHGDH-222ENST00000641587 VAMP2P63027 116 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 CD300CQ08708 224 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 C10orf55Q5SWW7 151 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 OR1L8Q8NGR8 309 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 THAP6Q8TBB0 222 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 NEURL2Q9BR09 285 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 RBKSQ9H477 322 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 PLEKHA3Q9HB20 300 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 PARP11Q9NR21 331 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 MBD2Q9UBB5 411 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 HSPB7Q9UBY9 170 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 CACFD1Q9UGQ2 172 aa7.7□□□□□ -1.18
PHGDH-222ENST00000641587 FRAS1Q86XX4 4008 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 IGHV4OR15-8A0A075B7B6 117 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 A0A087WW49 117 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 TEX50A0A1B0GTY4 177 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 FCN1O00602 326 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 SYNGR2O43760 224 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 SOX15O60248 233 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 MPC2O95563 127 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 IGLV1-40P01703 118 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 HLA-DRB1P01911 266 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 IL6RP08887 468 aaPredicted RBP7.69□□□□□ -1.18
PHGDH-222ENST00000641587 IGHV4-30-4P0DP06 118 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 RAB9AP51151 201 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 HSPE1P61604 102 aaKnown RBP7.69□□□□□ -1.18
PHGDH-222ENST00000641587 NDPQ00604 133 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 RUNX1Q01196 453 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 FXYD3Q14802 87 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 ZFP69Q49AA0 526 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 TMEM65Q6PI78 240 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 TCTE3Q8IZS6 198 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 DTD1Q8TEA8 209 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 SRSF12Q8WXF0 261 aaKnown RBP7.69□□□□□ -1.18
PHGDH-222ENST00000641587 HEYLQ9NQ87 328 aaPredicted RBP7.69□□□□□ -1.18
PHGDH-222ENST00000641587 PAIP2BQ9ULR5 123 aaKnown RBP7.69□□□□□ -1.18
PHGDH-222ENST00000641587 ZNF257Q9Y2Q1 563 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 FBXO7Q9Y3I1 522 aa7.69□□□□□ -1.18
PHGDH-222ENST00000641587 TRAV14DV4A0A0A6YYC5 116 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 IGHV7-81A0A0B4J1V7 117 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 TRAV41A0A0B4J266 112 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 A0A1W2PN81 502 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 DEDDO75618 318 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 APELAP0DMC3 54 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 CHRNA7P36544 502 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 CX3CL1P78423 397 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 PRCDQ00LT1 54 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 ID3Q02535 119 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 IL15RAQ13261 267 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 ECSCRQ19T08 205 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 ACSM6Q6P461 480 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 Q8N1Y9 231 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 OR52E5Q8NH55 327 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 CIB3Q96Q77 187 aaPredicted RBP7.68□□□□□ -1.18
PHGDH-222ENST00000641587 FAM103A1Q9BTL3 118 aaKnown RBP7.68□□□□□ -1.18
PHGDH-222ENST00000641587 HIPK2Q9H2X6 1198 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 ZC4H2Q9NQZ6 224 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 ZNF580Q9UK33 172 aa7.68□□□□□ -1.18
PHGDH-222ENST00000641587 MSGN1A6NI15 193 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 E5RGE8 158 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 LINC01619G3V211 115 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 H3BP45 60 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 IGHV3-11P01762 117 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 HNRNPCP07910 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
PHGDH-222ENST00000641587 NUP62P37198 522 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-222ENST00000641587 CAV2P51636 162 aa7.67□□□□□ -1.18
PHGDH-222ENST00000641587 MRGPRG-AS1Q2M3A8 158 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms