RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	ABCG5	Q9H222	651 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	SCN3B	Q9NY72	215 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	MGAT4A	Q9UM21	535 aa		4.8	□□□□□ -1.64
CASC19-238	ENST00000641523	TRAV39	A0A0B4J263	110 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	PNMA8C	A0A1B0GUJ8	204 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	DENR	O43583	198 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	LALBA	P00709	142 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	HBZ	P02008	142 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	IGLL1	P15814	213 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	C4BPB	P20851	252 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	VDAC1	P21796	283 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	PSMA1	P25786	263 aa	Known RBP	4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	LEP	P41159	167 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	REG1B	P48304	166 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	TRAM1	Q15629	374 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF329	Q86UD4	541 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523		Q8N6K4	173 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	ZFP41	Q8N8Y5	198 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	KLHL30-AS1	Q8NEE0	82 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	BPIFB6	Q8NFQ5	453 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	OR4K15	Q8NH41	348 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	TMEM59	Q9BXS4	323 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	RBKS	Q9H477	322 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	TAF9B	Q9HBM6	251 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	ISYNA1	Q9NPH2	558 aa		4.79	□□□□□ -1.64
CASC19-238	ENST00000641523	IGHV3-43	A0A0B4J1X8	118 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	IGHV3-72	A0A0B4J1Y9	119 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	MSGN1	A6NI15	193 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	YPEL1	O60688	119 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ARL6IP5	O75915	188 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	IFNA5	P01569	189 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	PRB2	P02812	416 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	CDK1	P06493	297 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	FABP1	P07148	127 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	GNAO1	P09471	354 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	IGHV3-43D	P0DP04	118 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	RPL35A	P18077	110 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	NKX2-5	P52952	324 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	EGFEM1P	Q0D2K5	195 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	OR5I1	Q13606	314 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	DIAPH2-AS1	Q14236	149 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	MMD	Q15546	238 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	TAL2	Q16559	108 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ACSM3	Q53FZ2	586 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	HSD17B12	Q53GQ0	312 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	CT45A1	Q5HYN5	189 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ACTL10	Q5JWF8	245 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	RBM48	Q5RL73	367 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	C1orf100	Q5SVJ3	147 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	FAM71E2	Q8N5Q1	922 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523		Q8N9W7	124 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF439	Q8NDP4	499 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	CT45A3	Q8NHU0	189 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	DTD1	Q8TEA8	209 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	DGCR14	Q96DF8	476 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	C2orf48	Q96LS8	159 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	NOL4L	Q96MY1	436 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	YPEL2	Q96QA6	119 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	BANF2	Q9H503	90 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	PLEKHA3	Q9HB20	300 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	CCDC59	Q9P031	241 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF107	Q9UII5	783 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	TPRKB	Q9Y3C4	175 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	DNAH3	Q8TD57	4116 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	SLC2A2	P11168	524 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	RCC1	P18754	421 aa	Predicted RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	PSMD7	P51665	324 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	RPS27A	P62979	156 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	KIR2DS1	Q14954	304 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	OXA1L	Q15070	435 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	MORN2	Q502X0	79 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	PVRIG	Q6DKI7	326 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	THOC7	Q6I9Y2	204 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	C10orf99	Q6UWK7	81 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	SSX7	Q7RTT5	188 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	LYPD6	Q86Y78	171 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ZFP82	Q8N141	532 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	OR1L1	Q8NH94	360 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	UBALD1	Q8TB05	177 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	MRPL30	Q8TCC3	161 aa	Known RBP	4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	C4orf3	Q8WVX3	66 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	PRAC1	Q96KF2	57 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	P2RX4	Q99571	388 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	TMED9	Q9BVK6	235 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	TM2D1	Q9BX74	207 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	MCUB	Q9NWR8	336 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF581	Q9P0T4	197 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	NBEAL2	Q6ZNJ1	2754 aa		4.78	□□□□□ -1.64
CASC19-238	ENST00000641523	SORL1	Q92673	2214 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	TRBV6-6	A0A0A6YYG2	114 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	OR5H14	A6NHG9	310 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	SLC22A1	O15245	554 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	IGLV2-11	P01706	119 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	HLA-DRB1	P01911	266 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	HBE1	P02100	147 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	UCHL1	P09936	223 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	ZP3	P21754	424 aa		4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	PPP1CC	P36873	323 aa	Known RBP	4.77	□□□□□ -1.65
CASC19-238	ENST00000641523	INSL3	P51460	131 aa		4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms