RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 E7EUB6 86 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 H7BYZ3 331 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 NDUFB4O95168 129 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 IGLV2-23P01705 113 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
TRIM3-215ENST00000639856 IL3RAP26951 378 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 GCHFRP30047 84 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 CHRNA7P36544 502 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 CD69Q07108 199 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 SPATA31B1PQ5VZV4 182 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 ANAPC16Q96DE5 110 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 DOK5Q9P104 306 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 MED13LQ71F56 2210 aa12.17□□□□□ -0.46
TRIM3-215ENST00000639856 CLN5O75503 358 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 ZNF843Q8N446 348 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 CACNG8Q8WXS5 425 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 TNFRSF14Q92956 283 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 LRRK2Q5S007 2527 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BKO60814 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BJP06899 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BOP23527 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BBP33778 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BDP58876 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BCP62807 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 MLANAQ16655 118 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST2H2BEQ16778 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HLA-DRB5Q30154 266 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.16□□□□□ -0.46
TRIM3-215ENST00000639856 FAM78BQ5VT40 261 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BHQ93079 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BNQ99877 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 HIST1H2BMQ99879 126 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 DERL1Q9BUN8 251 aa12.16□□□□□ -0.46
TRIM3-215ENST00000639856 ZMAT5Q9UDW3 170 aaKnown RBP12.16□□□□□ -0.46
TRIM3-215ENST00000639856 IGHV2-26A0A0B4J1V2 119 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 CGB1A6NKQ9 187 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 MT-CO2P00403 227 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 HOXA5P20719 270 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 S100PP25815 95 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 GALR1P47211 349 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 OR4P4Q8NGL7 312 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 C8orf46Q8TAG6 207 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 OR5B12Q96R08 314 aa12.15□□□□□ -0.46
TRIM3-215ENST00000639856 ZNF430Q9H8G1 570 aaPredicted RBP12.15□□□□□ -0.46
TRIM3-215ENST00000639856 FOXH1O75593 365 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 SMIM6P0DI80 62 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 OR10J1P30954 320 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
TRIM3-215ENST00000639856 NDUFA6P56556 154 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 WT1-ASQ06250 92 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 VMA21Q3ZAQ7 101 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 ONECUT1Q9UBC0 465 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 YTHDF2Q9Y5A9 579 aaKnown RBP12.14□□□□□ -0.47
TRIM3-215ENST00000639856 UBR5O95071 2799 aaPredicted RBP12.14□□□□□ -0.47
TRIM3-215ENST00000639856 FAM208BQ5VWN6 2430 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 SLC25A17O43808 307 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 ACTL6BO94805 426 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
TRIM3-215ENST00000639856 LGALS7P47929 136 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 EFNA4P52798 201 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 MIR17HGQ75NE6 70 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 FUT9Q9Y231 359 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 SPG11Q96JI7 2443 aa12.14□□□□□ -0.47
TRIM3-215ENST00000639856 S100A9P06702 114 aaKnown RBP12.13□□□□□ -0.47
TRIM3-215ENST00000639856 COX7A1P24310 79 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 PRRX1P54821 245 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 S100A12P80511 92 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 SLC16A13Q7RTY0 426 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 PNKDQ8N490 385 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 FRZBQ92765 325 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 C19orf24Q9BVV8 132 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
TRIM3-215ENST00000639856 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 PHOX2AO14813 284 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 CD99P14209 185 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
TRIM3-215ENST00000639856 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 RNASEH2CQ8TDP1 164 aaKnown RBP12.13□□□□□ -0.47
TRIM3-215ENST00000639856 RITA1Q96K30 269 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 TPSG1Q9NRR2 321 aa12.13□□□□□ -0.47
TRIM3-215ENST00000639856 CRYBG3Q68DQ2 2970 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 IGHV3-72A0A0B4J1Y9 119 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 ENSAO43768 121 aaKnown RBP12.12□□□□□ -0.47
TRIM3-215ENST00000639856 RBP4P02753 201 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 LIPFP07098 398 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
TRIM3-215ENST00000639856 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
TRIM3-215ENST00000639856 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRIM3-215ENST00000639856 MRGPRG-AS1Q2M3A8 158 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms