RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ZCCHC24Q8N2G6 241 aaKnown RBP13.85□□□□□ -0.19
SCARB2-210ENST00000638567 SLC25A33Q9BSK2 321 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 SPANXN1Q5VSR9 72 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 FAM90A2PQ658T7 463 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 Q6ZS49 121 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 FAM90A1Q86YD7 464 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 MRPL37Q9BZE1 423 aaKnown RBP13.85□□□□□ -0.19
SCARB2-210ENST00000638567 UPK2O00526 184 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 TM4SF5O14894 197 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-210ENST00000638567 CACNG8Q8WXS5 425 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 GGTLC1Q9BX51 225 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 CLEC7AQ9BXN2 247 aa13.85□□□□□ -0.19
SCARB2-210ENST00000638567 SCGB1C2P0DMR2 95 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 METRNQ9UJH8 293 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 IGHV1-69-2A0A0G2JMI3 117 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 IL4P05112 153 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 Q1RN00 199 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 NRN1Q9NPD7 142 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 Q6P435 159 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 PNKDQ8N490 385 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 FBXL15Q9H469 300 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 CACNA1BQ00975 2339 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 TRAV9-1A0A075B6T8 112 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 HLA-DRB1P01911 266 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 BTF3P20290 206 aaKnown RBP13.84□□□□□ -0.19
SCARB2-210ENST00000638567 COMPP49747 757 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-210ENST00000638567 SCGB1D4Q6XE38 83 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 OR52E5Q8NH55 327 aa13.84□□□□□ -0.19
SCARB2-210ENST00000638567 TRBV6-6A0A0A6YYG2 114 aa13.83□□□□□ -0.19
SCARB2-210ENST00000638567 TMEM70Q9BUB7 260 aa13.83□□□□□ -0.19
SCARB2-210ENST00000638567 USF3Q68DE3 2245 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 STAG3L2P0CL84 134 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 STAG3L3P0CL85 134 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 UBTD1Q9HAC8 227 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 IGHV1-18A0A0C4DH31 117 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
SCARB2-210ENST00000638567 CGB1A6NKQ9 187 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 MFAP4P55083 255 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 KCNS1Q96KK3 526 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 RALYQ9UKM9 306 aaKnown RBP13.83□□□□□ -0.2
SCARB2-210ENST00000638567 S4R3C0 116 aa13.83□□□□□ -0.2
SCARB2-210ENST00000638567 AP5S1Q9NUS5 200 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 PYYP10082 97 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 BMI1P35226 326 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 MYOZ3Q8TDC0 251 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 LINC00312Q9Y6C7 94 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 LINC00473A8K010 186 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 HIGD1CA8MV81 97 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 TIMP3P35625 211 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 ZNF585BQ52M93 769 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 ST6GALNAC3Q8NDV1 305 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 OR4C46A6NHA9 309 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 SRRM5B3KS81 715 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 SPATA31B1PQ5VZV4 182 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 OR10AG1Q8NH19 301 aa13.82□□□□□ -0.2
SCARB2-210ENST00000638567 CA1P00915 261 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-210ENST00000638567 MGPP08493 103 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 ST6GALNAC6Q969X2 333 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 K7ERU9 68 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-210ENST00000638567 PRR7Q8TB68 274 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 SEPSECSQ9HD40 501 aaKnown RBP13.81□□□□□ -0.2
SCARB2-210ENST00000638567 TRAV3A0A0B4J244 114 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 GNG5P63218 68 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 COLCA1Q6ZS62 124 aa13.81□□□□□ -0.2
SCARB2-210ENST00000638567 SSBP4Q9BWG4 385 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-210ENST00000638567 C10orf91Q5T1B1 145 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 TMEM256Q8N2U0 113 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 COQ2Q96H96 371 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 MIEN1Q9BRT3 115 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 PROK2Q9HC23 129 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 RNF115Q9Y4L5 304 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 CD69Q07108 199 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 IL15RAQ13261 267 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 TMEM78Q5T7P6 136 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 ZNF841Q6ZN19 808 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 IZUMO1RA6ND01 250 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 RPL7P18124 248 aaKnown RBP13.8□□□□□ -0.2
SCARB2-210ENST00000638567 BSPH1Q075Z2 132 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 OR10W1Q8NGF6 305 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 PRDM13Q9H4Q3 707 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 GAGE10A6NGK3 116 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 C17orf100A8MU93 164 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 LIPFP07098 398 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 PRCDQ00LT1 54 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 MEF2CQ06413 473 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-210ENST00000638567 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
SCARB2-210ENST00000638567 GPR82Q96P67 336 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 AGMATQ9BSE5 352 aa13.8□□□□□ -0.2
SCARB2-210ENST00000638567 A0A1W2PRE2 83 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 NTF4P34130 210 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-210ENST00000638567 WDR87Q6ZQQ6 2873 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 DMRTA1Q5VZB9 504 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms