RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 UCP1P25874 307 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 IGHMP01871 453 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 C1QL3Q5VWW1 255 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 RSPO2Q6UXX9 243 aaPredicted RBP12.87□□□□□ -0.35
UBE3A-227ENST00000638011 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 NEUROG3Q9Y4Z2 214 aa12.87□□□□□ -0.35
UBE3A-227ENST00000638011 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 TMEM42Q69YG0 159 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 SSBP3Q9BWW4 388 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-227ENST00000638011 APELAP0DMC3 54 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 WNT2BQ93097 391 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 ADMP35318 185 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 FABP5P3A8MUU1 101 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 LINC01555Q8NAE3 123 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 SLC50A1Q9BRV3 221 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 SIRT4Q9Y6E7 314 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-227ENST00000638011 LDLRAD4O15165 306 aa12.86□□□□□ -0.35
UBE3A-227ENST00000638011 PPDPFLQ8WWR9 84 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 CTGFP29279 349 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 RPRMLQ8N4K4 120 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 SRD5A1P18405 259 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 SLC25A53Q5H9E4 307 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 OR9G1Q8NH87 305 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 PHF7Q9BWX1 381 aaPredicted RBP12.85□□□□□ -0.35
UBE3A-227ENST00000638011 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
UBE3A-227ENST00000638011 ADAMTS9Q9P2N4 1935 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 SNAI2O43623 268 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 ZG16O60844 167 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 LINC01465Q8N7H1 131 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 DPH3Q96FX2 82 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 RAMP1O60894 148 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 PLAURQ03405 335 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 CCL4L1Q8NHW4 92 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 TDGF1P13385 188 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 SIGLEC14Q08ET2 396 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 HCP5Q6MZN7 132 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 KLHDC2Q9Y2U9 406 aa12.85□□□□□ -0.35
UBE3A-227ENST00000638011 ICAM4Q14773 271 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 JPT2Q9H910 190 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 IDI2-AS1Q9NZ38 188 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 DOPEY1Q5JWR5 2465 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 MYOD1P15172 320 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 UBE2WQ96B02 151 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 C9JCJ5 164 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 CCL7P80098 99 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 R4GN57 208 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 BCL6BQ8N143 479 aaPredicted RBP12.84□□□□□ -0.35
UBE3A-227ENST00000638011 GZMBP10144 247 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 TIMP3P35625 211 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
UBE3A-227ENST00000638011 AMBPP02760 352 aa12.83□□□□□ -0.35
UBE3A-227ENST00000638011 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 TGIF1Q15583 401 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 WFDC3Q8IUB2 231 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 AGMATQ9BSE5 352 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 ZSWIM8A7E2V4 1837 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 CD5P06127 495 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 PGFP49763 221 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 UTF1Q5T230 341 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 CGAP01215 116 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 CCL27Q9Y4X3 112 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 IGHV5-51A0A0C4DH38 117 aa12.83□□□□□ -0.36
UBE3A-227ENST00000638011 MAGEA5P43359 124 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 MYEOVQ96EZ4 313 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 Q9H3A6 140 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
UBE3A-227ENST00000638011 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 IL6RP08887 468 aaPredicted RBP12.82□□□□□ -0.36
UBE3A-227ENST00000638011 IGKV3D-11A0A0A0MRZ8 115 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 IGKV3-11P04433 115 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 IGKV3D-15A0A087WSY6 115 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 ZNHIT1O43257 154 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 LAMTOR3Q9UHA4 124 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 TECTAO75443 2155 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 UPK2O00526 184 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 SELLP14151 372 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 TEX45Q8NA69 505 aa12.82□□□□□ -0.36
UBE3A-227ENST00000638011 NUP210Q8TEM1 1887 aaPredicted RBP12.82□□□□□ -0.36
UBE3A-227ENST00000638011 SNRPCP09234 159 aaKnown RBP12.81□□□□□ -0.36
UBE3A-227ENST00000638011 GZMMP51124 257 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms