RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 UBE2E2Q96LR5 201 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 OR5B12Q96R08 314 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 B9D2Q9BPU9 175 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 FAM103A1Q9BTL3 118 aaKnown RBP6.05□□□□□ -1.44
PNKP-229ENST00000637897 LYRM2Q9NU23 88 aaPredicted RBP6.05□□□□□ -1.44
PNKP-229ENST00000637897 SDHAF2Q9NX18 166 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 FBXL17Q9UF56 701 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 CACFD1Q9UGQ2 172 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 TRAV41A0A0B4J266 112 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 RAB29O14966 203 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 RBFOX2O43251 390 aaKnown RBP eCLIP6.04□□□□□ -1.44
PNKP-229ENST00000637897 MED6O75586 246 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 IGKV1-5P01602 117 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 CAV2P51636 162 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 SLURP1P55000 103 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 RPL30P62888 115 aaKnown RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 EWSR1Q01844 656 aaKnown RBP eCLIP6.04□□□□□ -1.44
PNKP-229ENST00000637897 ZNF266Q14584 549 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 DEFB121Q5J5C9 76 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 FAM74A1Q5RGS3 127 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 HSD17B13Q7Z5P4 300 aaPredicted RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 SPAG16Q8N0X2 631 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 EIF4E3Q8N5X7 224 aaKnown RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 PCNPQ8WW12 178 aaKnown RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 TMED6Q8WW62 240 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 DLX4Q92988 240 aaPredicted RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 SAT2Q96F10 170 aaPredicted RBP6.04□□□□□ -1.44
PNKP-229ENST00000637897 ADTRPQ96IZ2 230 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 ARV1Q9H2C2 271 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 PARP11Q9NR21 331 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 CACNG5Q9UF02 275 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 PRELID3BQ9Y3B1 194 aa6.04□□□□□ -1.44
PNKP-229ENST00000637897 IGHV4OR15-8A0A075B7B6 117 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 A0A087WW49 117 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 A0A0G2JRQ6 117 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 MFSD2BA6NFX1 497 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 M0R1X1 148 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 SYNGR2O43760 224 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 LY86O95711 162 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 P0C879 139 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 DUTP33316 252 aaKnown RBP6.03□□□□□ -1.44
PNKP-229ENST00000637897 BRWD1-AS2P59051 145 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 BLOC1S1P78537 153 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 DEFA5Q01523 94 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 ECSCRQ19T08 205 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 H2BFWTQ7Z2G1 175 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 STX12Q86Y82 276 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 TMEM252Q8N6L7 170 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 OR1N2Q8NGR9 330 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 DDB2Q92466 427 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 SMIM8Q96KF7 97 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 RHOVQ96L33 236 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 CXorf58Q96LI9 332 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 CLCC1Q96S66 551 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 GINS3Q9BRX5 216 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 SMIM3Q9BZL3 60 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 MAGT1Q9H0U3 335 aa6.03□□□□□ -1.44
PNKP-229ENST00000637897 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
PNKP-229ENST00000637897 STARD9Q9P2P6 4700 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 A0A1W2PN81 502 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 IGSF23A1L1A6 192 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 RAB19A4D1S5 217 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 FAM24AA6NFZ4 105 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 LINC00473A8K010 186 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 SEC14L6B5MCN3 397 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 KRBOX1C9JBD0 128 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 RAMP3O60896 148 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 DFFBO76075 338 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 SCAF4O95104 1147 aaKnown RBP6.02□□□□□ -1.45
PNKP-229ENST00000637897 S1PR2O95136 353 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 HPRT1P00492 218 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 CA2P00918 260 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 KRASP01116 189 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 FGF2P09038 288 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 G6PCP35575 357 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 CHRNA7P36544 502 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 SULT1A2P50226 295 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 RAB5CP51148 216 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 PAX9P55771 341 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 ERVK-16P61578 105 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 NHLH2Q02577 135 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 TNFRSF9Q07011 255 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 TOR2AQ5JU69 321 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 UQCC3Q6UW78 93 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 ZNF562Q6V9R5 426 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 IL34Q6ZMJ4 242 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 Q6ZRM9 215 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 HAPLN4Q86UW8 402 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 LFNGQ8NES3 379 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 OR1S2Q8NGQ3 325 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 OR4S2Q8NH73 311 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 MARC2Q969Z3 335 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 CIB3Q96Q77 187 aaPredicted RBP6.02□□□□□ -1.45
PNKP-229ENST00000637897 MCRIP2Q9BUT9 160 aaKnown RBP6.02□□□□□ -1.45
PNKP-229ENST00000637897 HSPB7Q9UBY9 170 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 WASHC3Q9Y3C0 194 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 RYR2Q92736 4967 aa6.02□□□□□ -1.45
PNKP-229ENST00000637897 CSMD3Q7Z407 3707 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms