RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PLAUP00749 431 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 C8orf88P0DMB2 117 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 CXCL2P19875 107 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 ZNF90Q03938 601 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 TMEM167AQ8TBQ9 72 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 NEUROG1Q92886 237 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 SLC25A33Q9BSK2 321 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 CLEC5AQ9NY25 188 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 DOK5Q9P104 306 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 HSPB7Q9UBY9 170 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 FOXA2Q9Y261 457 aaPredicted RBP4.54□□□□□ -1.68
CHD2-227ENST00000637572 NOTCH3Q9UM47 2321 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 LINC00862A6NCI5 91 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 HELTA6NFD8 242 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 CYSRT1A8MQ03 144 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 BUB1B-PAK6H3BSN5 160 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 TIMM23O14925 209 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 OR2C1O95371 312 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 CA2P00918 260 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 SFTA3P0C7M3 94 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 SMCPP49901 116 aaPredicted RBP4.54□□□□□ -1.68
CHD2-227ENST00000637572 PSG9Q00887 426 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 OR51G1Q8NGK1 321 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 PCNPQ8WW12 178 aaKnown RBP4.54□□□□□ -1.68
CHD2-227ENST00000637572 SRSF12Q8WXF0 261 aaKnown RBP4.54□□□□□ -1.68
CHD2-227ENST00000637572 SSX3Q99909 188 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 PHF3Q92576 2039 aaKnown RBP4.54□□□□□ -1.68
CHD2-227ENST00000637572 IGHV1-3A0A0C4DH29 117 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 NPFFO15130 113 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 LY6EQ16553 131 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 TMEM144Q7Z5S9 345 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 ZFP82Q8N141 532 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 C21orf62Q9NYP8 219 aa4.54□□□□□ -1.68
CHD2-227ENST00000637572 CLDN34H7C241 214 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 DLX6P56179 175 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 ERVFC1-1P60608 527 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 OR5I1Q13606 314 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 DTX2Q86UW9 622 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 GPR82Q96P67 336 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 TXN2Q99757 166 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 TRAV40A0A0B4J280 105 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 IGHV2-70DA0A0C4DH43 119 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 IGSF23A1L1A6 192 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 FBLL1A6NHQ2 334 aaKnown RBP4.53□□□□□ -1.68
CHD2-227ENST00000637572 CHEK1O14757 476 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 TRGV3P03979 118 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 NPPCP23582 126 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 S100A4P26447 101 aaKnown RBP4.53□□□□□ -1.68
CHD2-227ENST00000637572 PAX5Q02548 391 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 HABP2Q14520 560 aaPredicted RBP4.53□□□□□ -1.68
CHD2-227ENST00000637572 PVRIGQ6DKI7 326 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 WDR86Q86TI4 376 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 MYPOPQ86VE0 399 aaPredicted RBP4.53□□□□□ -1.68
CHD2-227ENST00000637572 VKORC1L1Q8N0U8 176 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 ZNF525Q8N782 197 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 SEC11CQ9BY50 192 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 PLA2G2DQ9UNK4 145 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 C5orf42Q9H799 3197 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 FSTL3O95633 263 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 HSPB1P04792 205 aaKnown RBP4.53□□□□□ -1.68
CHD2-227ENST00000637572 OR9G9P0C7N8 305 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 BCL2P10415 239 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 SELLP14151 372 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 TPPP2P59282 170 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 PRSS8Q16651 343 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 CYP2G1PQ6ZSU1 146 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 OR5AN1Q8NGI8 311 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 OR4D5Q8NGN0 318 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 OR1P1Q8NH06 330 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 BLNKQ8WV28 456 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 GPHA2Q96T91 129 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 ABCA1O95477 2261 aa4.53□□□□□ -1.68
CHD2-227ENST00000637572 H0YJW9 148 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 LHBP01229 141 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 DANCRP0C864 163 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 RPEL1Q2QD12 228 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 Q5PR19 223 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 RNF152Q8N8N0 203 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 C11orf44Q8N8P7 122 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 CLDND2Q8NHS1 167 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 NPIPB3Q92617 1050 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 NABP2Q9BQ15 211 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 FAM74A7A6NL05 159 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 FNDC10F2Z333 226 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 GATCO43716 136 aaKnown RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 MYOD1P15172 320 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 SRSF4Q08170 494 aaKnown RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 BTN1A1Q13410 526 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 C2orf83Q53S99 150 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 NMSQ5H8A3 153 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 RBPMS2Q6ZRY4 209 aaKnown RBP4.52□□□□□ -1.69
CHD2-227ENST00000637572 CHD7Q9P2D1 2997 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 TMEM218A2RU14 115 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 MSGN1A6NI15 193 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 IGHV2-70P01814 119 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 AMY1AP04745 511 aa4.52□□□□□ -1.69
CHD2-227ENST00000637572 CD5P06127 495 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms