RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 TMEM140Q9NV12 185 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 SPCS3P61009 180 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 PAX8Q06710 450 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 PRSS8Q16651 343 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 HCP5Q6MZN7 132 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 C8orf31Q8N9H6 132 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 OR13D1Q8NGV5 346 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 FAM216AQ8WUB2 273 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 TNFRSF14Q92956 283 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 MGST2Q99735 147 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 CTDSP1Q9GZU7 261 aa10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
CNTNAP2-220ENST00000637555 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 B4DSR2 109 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 C11orf94C9JXX5 98 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 PPP1R2P9O14990 202 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 IGHV4-31P0DP07 118 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 PRTN3P24158 256 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 GNB1P62873 340 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 MIC13Q5XKP0 118 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 SLC25A48Q6ZT89 311 aaKnown RBP10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 PCGF1Q9BSM1 259 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 AKAP9Q99996 3911 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 SAA2-SAA4A0A096LPE2 208 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 SAA2P0DJI9 122 aaPredicted RBP10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 S100PP25815 95 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 GNG10P50151 68 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 PRB3Q04118 309 aaPredicted RBP10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 CIARTQ8N365 385 aaPredicted RBP10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 LINC00311Q8N616 119 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 TBX15Q96SF7 602 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 S1PR3Q99500 378 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 PYGO2Q9BRQ0 406 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 MANBALQ9NQG1 85 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 GAB2Q9UQC2 676 aa10.27□□□□□ -0.77
CNTNAP2-220ENST00000637555 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 SOX15O60248 233 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 FABP4P15090 132 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 S100A2P29034 98 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 TMEM249Q2WGJ8 235 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 ACOT6Q3I5F7 207 aaPredicted RBP10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 ZNF383Q8NA42 475 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 TCF19Q9Y242 345 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 CSMD1Q96PZ7 3565 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 MED13LQ71F56 2210 aa10.26□□□□□ -0.77
CNTNAP2-220ENST00000637555 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 H7BYZ3 331 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 J3QR06 171 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 HOXB4P17483 251 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 GALR1P47211 349 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 KLRD1Q13241 179 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 CST9LP1Q5W188 147 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 WNK2Q9Y3S1 2297 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 NDUFB4O95168 129 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 IGLV1-47P01700 117 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 CHRNA7P36544 502 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 RAB7AP51149 207 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 OR11H6Q8NGC7 330 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 OR9G1Q8NH87 305 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 TMEM186Q96B77 213 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 RHOVQ96L33 236 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 CLEC7AQ9BXN2 247 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 SRD5A3Q9H8P0 318 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 ITPR3Q14573 2671 aa10.25□□□□□ -0.77
CNTNAP2-220ENST00000637555 TRBV20OR9-2A0A075B6H5 130 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 A0A1W2PPQ1 181 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 RBFOX2O43251 390 aaKnown RBP eCLIP10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 TOX4O94842 621 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 ARL14EPLP0DKL9 152 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 FAM3BP58499 235 aaPredicted RBP10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 ERVK-16P61578 105 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 PDLIM3Q53GG5 364 aaPredicted RBP10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 SPATA31B1PQ5VZV4 182 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 OR52E5Q8NH55 327 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 PXMP4Q9Y6I8 212 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 BAHCC1Q9P281 2608 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 FAM90A9PA6NNJ1 464 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 ODF3BA8MYP8 253 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 COX7A1P24310 79 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 FAM209BQ5JX69 171 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 LINC01551Q86U37 167 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 LYG1Q8N1E2 194 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 PNKDQ8N490 385 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 BEND2Q8NDZ0 799 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 HIF1ANQ9NWT6 349 aa10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 LSM4Q9Y4Z0 139 aaKnown RBP10.24□□□□□ -0.77
CNTNAP2-220ENST00000637555 C15orf61A6NNL5 157 aa10.23□□□□□ -0.77
CNTNAP2-220ENST00000637555 IGKV1-16P04430 117 aa10.23□□□□□ -0.77
CNTNAP2-220ENST00000637555 OPRK1P41145 380 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms