RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	TRBV6-7	A0A0A0MS04	114 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	ADCYAP1	P18509	176 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	CR1L	Q2VPA4	569 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	HS3ST6	Q96QI5	342 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	PLXNA2	O75051	1894 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	SRRM5	B3KS81	715 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	ZNF253	O75346	499 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	FAM89B	Q8N5H3	189 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	SGMS2	Q8NHU3	365 aa		11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	BEX4	Q9NWD9	120 aa	Predicted RBP	11.9	□□□□□ -0.5
NEDD4L-238	ENST00000635997	TRGV3	P03979	118 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MEF2B	Q02080	365 aa	Predicted RBP	11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MORN2	Q502X0	79 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	BPIFA4P	Q86YQ2	179 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	LINC01356	Q8N9X3	169 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	NRGN	Q92686	78 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	GALNT14	Q96FL9	552 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	NABP2	Q9BQ15	211 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	DENND4C	Q5VZ89	1909 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CD55	P08174	381 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CEACAM8	P31997	349 aa	Predicted RBP	11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	IER3	P46695	156 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	RPL30	P62888	115 aa	Known RBP	11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	LRRC75B	Q2VPJ9	315 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	C10orf55	Q5SWW7	151 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	KIR3DL3	Q8N743	410 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ZNF735	P0CB33	412 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	GRN	P28799	593 aa	Known RBP	11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	C8orf46	Q8TAG6	207 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MFAP2	P55001	183 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TM4SF20	Q53R12	229 aa		11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.89	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CORT	O00230	105 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CD8A	P01732	235 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ARL14EPL	P0DKL9	152 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	AMT	P48728	403 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	RPEL1	Q2QD12	228 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	FAM90A26	D6RGX4	464 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MLNR	O43193	412 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CRYBB3	P26998	211 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	FAM3B	P58499	235 aa	Predicted RBP	11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	LY6G6F	Q5SQ64	297 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	GFI1B	Q5VTD9	330 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	GBGT1	Q8N5D6	347 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	METTL26	Q96S19	204 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	FUT9	Q9Y231	359 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	HNRNPA3	P51991	378 aa	Known RBP	11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ZNF497	Q6ZNH5	498 aa		11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	OSR1	Q8TAX0	266 aa	Predicted RBP	11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	FOXA2	Q9Y261	457 aa	Predicted RBP	11.88	□□□□□ -0.51
NEDD4L-238	ENST00000635997	NDUFS8	O00217	210 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	IGHV2-70	P01814	119 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	GPR183	P32249	361 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MEF2C	Q06413	473 aa	Predicted RBP	11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ZNF738	Q8NE65	137 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	FAM215A	Q9Y5M1	114 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MPDU1	O75352	247 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	SAA1	P0DJI8	122 aa	Predicted RBP	11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	PNRC1	Q12796	327 aa	Predicted RBP	11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	STPG3	Q8N7X2	389 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	IGFBP2	P18065	325 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	KLRD1	Q13241	179 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	OR51G1	Q8NGK1	321 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	SMIM8	Q96KF7	97 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TBX15	Q96SF7	602 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TMEM133	Q9H2Q1	129 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	PRRC2A	P48634	2157 aa	Known RBP	11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	AMY1A	P04745	511 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ADIPOQ	Q15848	244 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	HIST3H3	Q16695	136 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	BRD3OS	Q6XYD6	125 aa		11.87	□□□□□ -0.51
NEDD4L-238	ENST00000635997	SNURFL	B1AK76	121 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997		M0QZK8	103 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	GGCT	O75223	188 aa	Known RBP	11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	MGP	P08493	103 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	RND3	P61587	244 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	PQLC2	Q6ZP29	291 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	PLSCR2	Q9NRY7	297 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ALPK3	Q96L96	1907 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	BMPR1B	O00238	502 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TIMM23	O14925	209 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	C8orf88	P0DMB2	117 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	DLX1	P56177	255 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TFF3	Q07654	80 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CD177	Q8N6Q3	437 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	FBXL7	Q9UJT9	491 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ARL6IP6	Q8N6S5	226 aa		11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.86	□□□□□ -0.51
NEDD4L-238	ENST00000635997	PDE6D	O43924	150 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	CRISP2	P16562	243 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ATP5G2	Q06055	141 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	HLA-DRB5	Q30154	266 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	DGAT2L7P	Q6IED9	249 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TMEM219	Q86XT9	240 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997		A0A0C4DFX4	3053 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	COL8A2	P25067	703 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	ZNF146	Q15072	292 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	TMEM78	Q5T7P6	136 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	SPANXN1	Q5VSR9	72 aa		11.85	□□□□□ -0.51
NEDD4L-238	ENST00000635997	WDR25	Q64LD2	544 aa	Predicted RBP	11.85	□□□□□ -0.51

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