RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TCF20Q9UGU0 1960 aaKnown RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF236Q9UL36 1845 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 ITGB1BP1O14713 200 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 OVOL1O14753 267 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 CDKN1AP38936 164 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF79Q15937 498 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 C20orf204Q6ZNR8 217 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 COQ2Q96H96 371 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 SIGLEC12Q96PQ1 595 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 IFI27L2Q9H2X8 130 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 LINC00312Q9Y6C7 94 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 V9GYH0 126 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 FOXS1O43638 330 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 IL11P20809 199 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ERCC8Q13216 396 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 LURAP1LQ8IV03 231 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ATOH7Q8N100 152 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 BMPERQ8N8U9 685 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 FAM181AQ8N9Y4 354 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 CEP250Q9BV73 2442 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 GREB1Q4ZG55 1949 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 F2Z2F3 143 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ZIC3O60481 467 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ATP1A1-AS1Q5TC04 95 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 GDF15Q99988 308 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ZGRF1Q86YA3 2104 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 C15orf61A6NNL5 157 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 C17orf100A8MU93 164 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF883P0CG24 379 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 SEC11AP67812 179 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 C6orf226Q5I0X4 101 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 OTORQ9NRC9 128 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 PHF3Q92576 2039 aaKnown RBP4.69□□□□□ -1.66
SCN1A-209ENST00000635750 KBTBD11-OT1A0A1B0GTJ5 212 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 TNFRSF6BO95407 300 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 SRSF4Q08170 494 aaKnown RBP4.69□□□□□ -1.66
SCN1A-209ENST00000635750 HEATR5AQ86XA9 2040 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 SLC22A18ASQ8N1D0 253 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 TRAV40A0A0B4J280 105 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 UPK2O00526 184 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 RHOGP84095 191 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 RPL39P5Q59GN2 51 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 PVRIGQ6DKI7 326 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 TEX38Q6PEX7 206 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 SLC25A45Q8N413 288 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 SRXN1Q9BYN0 137 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ELF5Q9UKW6 265 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-209ENST00000635750 CHTOPQ9Y3Y2 248 aaKnown RBP4.69□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF561-AS1K7EIQ3 104 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 LEPROTO15243 131 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 DPM2O94777 84 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 EGR4Q05215 589 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 OR10W1Q8NGF6 305 aa4.69□□□□□ -1.66
SCN1A-209ENST00000635750 A0A1B0GTL3 188 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 A0A1W2PQF6 199 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 C22orf46C9J442 243 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 H3BMM0 161 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 C21orf62-AS1Q17RA5 79 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 WFIKKN1Q96NZ8 548 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 A0A1W2PPV9 198 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 GCM2O75603 506 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-209ENST00000635750 NKAPP1Q8N9T2 125 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF48Q96MX3 618 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-209ENST00000635750 MGST2Q99735 147 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 FOXJ2Q9P0K8 574 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 EP300Q09472 2414 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-209ENST00000635750 DOCK8Q8NF50 2099 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 TRGV1A0A0A0MS02 117 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM238C9JI98 176 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 CXCL3P19876 107 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 PEBP1P30086 187 aaKnown RBP4.68□□□□□ -1.66
SCN1A-209ENST00000635750 LY6DQ14210 128 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 GAGE2EQ4V326 116 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 VKORC1Q9BQB6 163 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 SNHG12Q9BXW3 62 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 GAGE2DQ9UEU5 116 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 PEX11BO96011 259 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 LINC00614P0C842 121 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 KLHL30-AS1Q8NEE0 82 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 RASL10AQ92737 203 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 TNFSF13O75888 250 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 VENTXO95231 258 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 MDKP21741 143 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-209ENST00000635750 OR11H7Q8NGC8 314 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 IL36BQ9NZH7 164 aa4.68□□□□□ -1.66
SCN1A-209ENST00000635750 CECR9P0C854 216 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 NAT1P18440 290 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 TRIOBPQ9H2D6 2365 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 PSG1P11464 419 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 STRCP1A6NGW2 1772 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 COL22A1Q8NFW1 1626 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-209ENST00000635750 IGHV2OR16-5A0A0B4J2B6 119 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 MUC21A0A0G2JKD1 596 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 MUC21A0A140T8X8 626 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM8BA6NDV4 472 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 PPBPP02775 128 aa4.67□□□□□ -1.66
SCN1A-209ENST00000635750 APOC4P55056 127 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms