RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 OR13A1Q8NGR1 328 aa9.81□□□□□ -0.84
COL11A1-211ENST00000635193 IGKV1D-8A0A087WSZ0 117 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 DPM2O94777 84 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 MST1P26927 711 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 ZNF56Q15929 161 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 SLX1AQ9BQ83 275 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 A0A1W2PRE2 83 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 GPX1P07203 203 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 OR52E5Q8NH55 327 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 MOB4Q9Y3A3 225 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 KBTBD11-OT1A0A1B0GTJ5 212 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 SRSF4Q08170 494 aaKnown RBP9.8□□□□□ -0.84
COL11A1-211ENST00000635193 OR13C6PQ8NH95 151 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
COL11A1-211ENST00000635193 GDF15Q99988 308 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 CRIM1Q9NZV1 1036 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 SIPA1L1O43166 1804 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 PATJQ8NI35 1801 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 A0A1W2PR77 199 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 TIMP3P35625 211 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 NRN1LQ496H8 165 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 DMRTA2Q96SC8 542 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 VSIRQ9H7M9 311 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
COL11A1-211ENST00000635193 ZDBF2Q9HCK1 2354 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 TRAV1-1A0A0B4J248 108 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 IGHV4-39P01824 125 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 CD55P08174 381 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 COX11Q9Y6N1 276 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 NYNRINQ9P2P1 1898 aaKnown RBP9.79□□□□□ -0.84
COL11A1-211ENST00000635193 ERVK11-1P61568 191 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-211ENST00000635193 CACNA1GO43497 2377 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 GATA2P23769 480 aaPredicted RBP9.79□□□□□ -0.84
COL11A1-211ENST00000635193 RAB9AP51151 201 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 TEX45Q8NA69 505 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 FER1L6-AS1Q8NA97 138 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 OR5AN1Q8NGI8 311 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 NCOR1P1Q9H4R4 102 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 MYOFQ9NZM1 2061 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 SUPT4H1P63272 117 aaKnown RBP9.79□□□□□ -0.84
COL11A1-211ENST00000635193 LHFPL1Q86WI0 220 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 SHISA5Q8N114 240 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 COQ2Q96H96 371 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 SLC25A2Q9BXI2 301 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 SNHG12Q9BXW3 62 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 ZNF319Q9P2F9 582 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
COL11A1-211ENST00000635193 PPIAL4CA0A0B4J2A2 164 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 SPAARA0A1B0GVQ0 90 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 PPIAL4GP0DN37 164 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 SUMO2P61956 95 aaKnown RBP9.78□□□□□ -0.84
COL11A1-211ENST00000635193 SCN8AQ9UQD0 1980 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 OCIAD2Q56VL3 154 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 DNM1P46Q6ZS02 220 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 VKORC1Q9BQB6 163 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 TIMP4Q99727 224 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 A0A0G2JMZ2 1700 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 LRRC37A2A6NM11 1700 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 NPIPB11E5RHQ5 1161 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 PAX2Q02962 417 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 DNASE2BQ8WZ79 361 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 CLEC7AQ9BXN2 247 aa9.78□□□□□ -0.84
COL11A1-211ENST00000635193 M0R381 172 aa9.77□□□□□ -0.84
COL11A1-211ENST00000635193 NKX2-8O15522 239 aa9.77□□□□□ -0.84
COL11A1-211ENST00000635193 Q6ZT83 130 aa9.77□□□□□ -0.84
COL11A1-211ENST00000635193 Q9H3A6 140 aa9.77□□□□□ -0.84
COL11A1-211ENST00000635193 IGKCP01834 107 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 CACNG8Q8WXS5 425 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 DCTN5Q9BTE1 182 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 A0A087X0K7 114 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 PPP1R32Q7Z5V6 425 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 CST9LQ9H4G1 147 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 ZNF703Q9H7S9 590 aaPredicted RBP9.77□□□□□ -0.85
COL11A1-211ENST00000635193 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 LCN12Q6JVE5 192 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 TMEM144Q7Z5S9 345 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 LINC01551Q86U37 167 aa9.77□□□□□ -0.85
COL11A1-211ENST00000635193 LINC00271P0C7V0 271 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 PF4V1P10720 104 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 GNG5P63218 68 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 TSKUQ8WUA8 353 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 PDCD11Q14690 1871 aaKnown RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 MTCL1Q9Y4B5 1905 aaKnown RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 CELA3AP09093 270 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 NPSP0C0P6 89 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 BCL6BQ8N143 479 aaPredicted RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 CHD5Q8TDI0 1954 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 PSME4Q14997 1843 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 hDV102S1A0JD36 115 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 CD5LO43866 347 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 RAMP3O60896 148 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 FLVCR1-AS1Q8TAF5 88 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 WBP1Q96G27 269 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 DEPPQ9NTK1 212 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms