RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 A0A0A6YYH2 397 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 MEIS3P1A6NDR6 274 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 A6NJ64 397 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 DBX1A6NMT0 343 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 SCAND1P57086 179 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 CMTM1Q8IZ96 169 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 LILRB2Q8N423 598 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 OR5H6Q8NGV6 325 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 NRG4Q8WWG1 115 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 AUNIPQ9H7T9 357 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 DIABLOQ9NR28 239 aa11.33□□□□□ -0.6
PDLIM3-213ENST00000629667 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 ZNF705EA8MWA4 302 aaPredicted RBP11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 P0DMU3 169 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 FAM231AP0DMU4 169 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 FAM231CP0DMU5 169 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 SPP1P10451 314 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 MXD1Q05195 221 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 TRPT1Q86TN4 253 aaKnown RBP11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 POM121L12Q8N7R1 296 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 CNBD2Q96M20 576 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 ZNF2Q9BSG1 426 aaPredicted RBP11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 IFT46Q9NQC8 304 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 SSR3Q9UNL2 185 aa11.32□□□□□ -0.6
PDLIM3-213ENST00000629667 ELOA3CA0A087WX78 387 aaPredicted RBP11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 M0R2N4 97 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 PSMB9P28065 219 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 SDC2P34741 201 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 NPBWR1P48145 328 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 RFX2P48378 723 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 IDNKQ5T6J7 187 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 DHRS11Q6UWP2 260 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 ZNF600Q6ZNG1 722 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 ZNF114Q8NC26 417 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 OR4A16Q8NH70 328 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 MOB3AQ96BX8 217 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 X6R8D5 127 aa11.31□□□□□ -0.6
PDLIM3-213ENST00000629667 PKD1P98161 4303 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 GPR31O00270 319 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 RTL8CO15255 209 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 AMBPP02760 352 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 C4BPBP20851 252 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 ERHP84090 104 aaKnown RBP11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 UBE2UQ5VVX9 321 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 STXBP6Q8NFX7 210 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 TBC1D24Q9ULP9 559 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 DNAH11Q96DT5 4516 aa11.3□□□□□ -0.6
PDLIM3-213ENST00000629667 A0A1W2PS18 150 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 NPPCP23582 126 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 PRCDQ00LT1 54 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 ZNF767PQ75MW2 155 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 H2BFWTQ7Z2G1 175 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
PDLIM3-213ENST00000629667 ABCA13Q86UQ4 5058 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 KNCNA6PVL3 124 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 K7EQG2 157 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 PMP2P02689 132 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 CLEC2LP0C7M8 214 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 ZNF688P0C7X2 276 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 S100GP29377 79 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 C12orf74Q32Q52 190 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 PHLDA2Q53GA4 152 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 ACTL10Q5JWF8 245 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 OR5H2Q8NGV7 314 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 OR6F1Q8NGZ6 308 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 FXYD6Q9H0Q3 95 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
PDLIM3-213ENST00000629667 A0A1B0GU03 582 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 TMEM50AO95807 157 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 TAS2R46P59540 309 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 HSPE1P61604 102 aaKnown RBP11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 SEC22AQ96IW7 307 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 METTL26Q96S19 204 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 VCX3BQ9H321 246 aa11.27□□□□□ -0.61
PDLIM3-213ENST00000629667 NPY1RP25929 384 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 SNCAP37840 140 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 HSPA13P48723 471 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 IZUMO2Q6UXV1 221 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 SPARTQ8N0X7 666 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 FCGR1BQ92637 280 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 NARS2Q96I59 477 aaKnown RBP11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
PDLIM3-213ENST00000629667 FAM212BQ9NTI7 297 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms