RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SULT1A1P50225 295 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 DYNLT3P51808 116 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 HLA-DRB3P79483 266 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 HERPUD1Q15011 391 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 ZNF585BQ52M93 769 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 LRP11Q86VZ4 500 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 MUC15Q8N387 334 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 MRPL30Q8TCC3 161 aaKnown RBP9.48□□□□□ -0.89
LINC00538-201ENST00000626109 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 TENM4Q6N022 2769 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 IGKV1D-13A0A0B4J2D9 117 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 HSPB6O14558 160 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 MPDU1O75352 247 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 IGKV1-13P0DP09 117 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 PPP1CCP36873 323 aaKnown RBP9.48□□□□□ -0.89
LINC00538-201ENST00000626109 ZNF880Q6PDB4 577 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 ABHD12Q8N2K0 398 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 LSM10Q969L4 123 aaKnown RBP9.48□□□□□ -0.89
LINC00538-201ENST00000626109 CABLES2Q9BTV7 478 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 TAAR3PQ9P1P4 343 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 SYNGR1O43759 233 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 HSPB1P04792 205 aaKnown RBP9.47□□□□□ -0.89
LINC00538-201ENST00000626109 TAS2R30P59541 319 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 H1FOOQ8IZA3 346 aaPredicted RBP9.47□□□□□ -0.89
LINC00538-201ENST00000626109 SCGB1C1Q8TD33 95 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 Q8WTZ3 238 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 RTL8AQ9BWD3 113 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 FGF23Q9GZV9 251 aaPredicted RBP9.47□□□□□ -0.89
LINC00538-201ENST00000626109 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 DYNLRB1Q9NP97 96 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 SIGLEC8Q9NYZ4 499 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 CADP27708 2225 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 RTTNQ86VV8 2226 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 ADGRG4Q8IZF6 3080 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 ICE1Q9Y2F5 2266 aa9.47□□□□□ -0.89
LINC00538-201ENST00000626109 TRAV24A0A0B4J272 114 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 IGKV1-6A0A0C4DH72 117 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 PPP5D1E7EU14 171 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 J3QT63 122 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 CST7O76096 145 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.89
LINC00538-201ENST00000626109 C20orf204Q6ZNR8 217 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 RDH5Q92781 318 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 SIGMAR1Q99720 223 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 RARRES2Q99969 163 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 ZNF665Q9H7R5 613 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 CBLN4Q9NTU7 201 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 OR1A1Q9P1Q5 309 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 METTL1Q9UBP6 276 aaKnown RBP9.46□□□□□ -0.89
LINC00538-201ENST00000626109 WSB1Q9Y6I7 421 aa9.46□□□□□ -0.89
LINC00538-201ENST00000626109 A0A087WWC5 75 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 A0A1B0GV50 99 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 TNFSF12O43508 249 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 ATP5LO75964 103 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 LRRC75BQ2VPJ9 315 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 KHDC3LQ587J8 217 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 ZNF787Q6DD87 383 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 C1QL4Q86Z23 238 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 FAM24BQ8N5W8 94 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 OR4P4Q8NGL7 312 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 OR10G9Q8NGN4 311 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 OR51I2Q9H344 312 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 PSG8Q9UQ74 426 aa9.46□□□□□ -0.9
LINC00538-201ENST00000626109 DOPEY2Q9Y3R5 2298 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 CXorf65A6NEN9 183 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 CA6P23280 308 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 PPIFP30405 207 aaKnown RBP9.45□□□□□ -0.9
LINC00538-201ENST00000626109 PAFAH1B2P68402 229 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 HBG1P69891 147 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 HBG2P69892 147 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 ZNF154Q13106 437 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 KIAA0141Q14154 515 aaPredicted RBP9.45□□□□□ -0.9
LINC00538-201ENST00000626109 SPSB3Q6PJ21 355 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 DTX2Q86UW9 622 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 TCTEX1D2Q8WW35 142 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 GPR146Q96CH1 333 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 NIPSNAP3BQ9BS92 247 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 MSL2Q9HCI7 577 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 IL36RNQ9UBH0 155 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 JPT1Q9UK76 154 aa9.45□□□□□ -0.9
LINC00538-201ENST00000626109 SPTAN1Q13813 2472 aaKnown RBP9.45□□□□□ -0.9
LINC00538-201ENST00000626109 USP9YO00507 2555 aaPredicted RBP9.45□□□□□ -0.9
LINC00538-201ENST00000626109 B4DEV8 164 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 H3BQ15 152 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 SOD3P08294 240 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
LINC00538-201ENST00000626109 OR8U8P0C7N1 319 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 TEPPQ6URK8 271 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 Q71RC1 249 aaPredicted RBP9.44□□□□□ -0.9
LINC00538-201ENST00000626109 NIT1Q86X76 327 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 OR51H1Q8NH63 302 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 IL1F10Q8WWZ1 152 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 ADTRPQ96IZ2 230 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms