RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 AP1S3Q96PC3 154 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 CDX2Q99626 313 aaPredicted RBP12.51□□□□□ -0.41
PMS1-221ENST00000624204 OOEPA6NGQ2 149 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 CHRDL1Q9BU40 450 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 TPPP3Q9BW30 176 aa12.51□□□□□ -0.41
PMS1-221ENST00000624204 LEPROTL1O95214 131 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
PMS1-221ENST00000624204 OR1C1Q15619 314 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 PEF1Q9UBV8 284 aaKnown RBP12.5□□□□□ -0.41
PMS1-221ENST00000624204 TCF19Q9Y242 345 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 C7orf71A4D174 169 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 IGLV2-8P01709 118 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 Q8IYB0 196 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 HES7Q9BYE0 225 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 ENY2Q9NPA8 101 aa12.5□□□□□ -0.41
PMS1-221ENST00000624204 SYS1-DBNDD2H3BUS1 97 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 ZNF207O43670 478 aaKnown RBP12.49□□□□□ -0.41
PMS1-221ENST00000624204 COX6A1P12074 109 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 CCL4P13236 92 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 VDAC2P45880 294 aaPredicted RBP12.49□□□□□ -0.41
PMS1-221ENST00000624204 RPS20P60866 119 aaKnown RBP12.49□□□□□ -0.41
PMS1-221ENST00000624204 LYSMD4Q5XG99 296 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
PMS1-221ENST00000624204 ASCL2Q99929 193 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 TMEM191AQ9H0A3 160 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 CACNA1BQ00975 2339 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 TRAV5A0A0B4J249 113 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 A0A1W2PQM1 296 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 HIGD1CA8MV81 97 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 FAM214BQ7L5A3 538 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 IMMP1LQ96LU5 166 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 CFAP47Q6ZTR5 3102 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 IGHV5-10-1A0A0J9YXX1 117 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 SNRNP40Q96DI7 357 aaKnown RBP12.49□□□□□ -0.41
PMS1-221ENST00000624204 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
PMS1-221ENST00000624204 PRSS46E5RG02 174 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 ARR3P36575 388 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 CD5LO43866 347 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 ZNF146Q15072 292 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 FER1L6-AS1Q8NA97 138 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 OR1B1Q8NGR6 318 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 Q8TCH9 128 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 BLNKQ8WV28 456 aa12.48□□□□□ -0.41
PMS1-221ENST00000624204 CHTOPQ9Y3Y2 248 aaKnown RBP12.48□□□□□ -0.41
PMS1-221ENST00000624204 GNG7O60262 68 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 FXYD7P58549 80 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 TNRC6AQ8NDV7 1962 aaKnown RBP12.47□□□□□ -0.41
PMS1-221ENST00000624204 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 WNK2Q9Y3S1 2297 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 APELAP0DMC3 54 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 IGFBP4P22692 258 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
PMS1-221ENST00000624204 COQ2Q96H96 371 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 COMMD5Q9GZQ3 224 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 TANC2Q9HCD6 1990 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 ERVK11-1P61568 191 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
PMS1-221ENST00000624204 ZNF503Q96F45 646 aa12.47□□□□□ -0.41
PMS1-221ENST00000624204 C2CD4DB7Z1M9 353 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 GPR183P32249 361 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
PMS1-221ENST00000624204 Q6ZR03 302 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 IGLC1P0CG04 106 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 TMPRSS3P57727 454 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 TMEM251Q8N6I4 163 aa12.46□□□□□ -0.41
PMS1-221ENST00000624204 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.42
PMS1-221ENST00000624204 GNG5P63218 68 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 SMIM21Q3B7S5 101 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 WDR31Q8NA23 367 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.42
PMS1-221ENST00000624204 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 IGF2BP2-AS1Q96M15 143 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 S1PR3Q99500 378 aa12.46□□□□□ -0.42
PMS1-221ENST00000624204 PINLYPA6NC86 204 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 SPINT2O43291 252 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 TAS2R45P59539 299 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 PRR20EP86478 221 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 PRR20CP86479 221 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 PRR20DP86480 221 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 PRR20BP86481 221 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 PRR20AP86496 221 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 FOXE3Q13461 319 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 NCKAP5O14513 1909 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 PROP1O75360 226 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 HIST1H1AQ02539 215 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms