RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 AMBPP02760 352 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 OR10J1P30954 320 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 ERHP84090 104 aaKnown RBP7.63□□□□□ -1.19
PDPN-212ENST00000621990 HLA-DRB5Q30154 266 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 PRR30Q53SZ7 412 aaPredicted RBP7.63□□□□□ -1.19
PDPN-212ENST00000621990 OR5T1Q8NG75 326 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 WASHC3Q9Y3C0 194 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 APC2O95996 2303 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 E7EUB6 86 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 YPEL3P61236 119 aaPredicted RBP7.63□□□□□ -1.19
PDPN-212ENST00000621990 WT1-ASQ06250 92 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 DIAPH2-AS1Q14236 149 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 PSG5Q15238 335 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 CLEC12BQ2HXU8 276 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 MRGPRG-AS1Q2M3A8 158 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 PVRIGQ6DKI7 326 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 OR5R1Q8NH85 324 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 OR9G1Q8NH87 305 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 SGMS2Q8NHU3 365 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 TMEM37Q8WXS4 190 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 H1FXQ92522 213 aaKnown RBP7.63□□□□□ -1.19
PDPN-212ENST00000621990 VKORC1Q9BQB6 163 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 MRPL32Q9BYC8 188 aaKnown RBP7.63□□□□□ -1.19
PDPN-212ENST00000621990 SH3BGRL2Q9UJC5 107 aa7.63□□□□□ -1.19
PDPN-212ENST00000621990 TRBV23-1A0A0A0MS06 115 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 IGHV1-8P0DP01 117 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 MC5RP33032 325 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 REG1BP48304 166 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 TAS2R45P59539 299 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 MLANAQ16655 118 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 OR10G8Q8NGN5 311 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 EAF1Q96JC9 268 aaPredicted RBP7.62□□□□□ -1.19
PDPN-212ENST00000621990 SLC25A33Q9BSK2 321 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 ARFGEF3Q5TH69 2177 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 A0A1W2PRE2 83 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 ACTL6BO94805 426 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 OR10J4P0C629 311 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 APOBEC3AP31941 199 aaPredicted RBP7.62□□□□□ -1.19
PDPN-212ENST00000621990 RBPJQ06330 500 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 JOSD1Q15040 202 aaPredicted RBP7.62□□□□□ -1.19
PDPN-212ENST00000621990 ARL6IP6Q8N6S5 226 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 TNFRSF14Q92956 283 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 RNF2Q99496 336 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 ZNF430Q9H8G1 570 aaPredicted RBP7.62□□□□□ -1.19
PDPN-212ENST00000621990 DYNLRB1Q9NP97 96 aa7.62□□□□□ -1.19
PDPN-212ENST00000621990 MAP1BP46821 2468 aaKnown RBP7.62□□□□□ -1.19
PDPN-212ENST00000621990 IGHV1-69-2A0A0G2JMI3 117 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 A0A0U1RQK1 487 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 ZNF320A2RRD8 509 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 B9A039 149 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 C8orf88P0DMB2 117 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 GATA2P23769 480 aaPredicted RBP7.61□□□□□ -1.19
PDPN-212ENST00000621990 THAP8Q8NA92 274 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 FAM167A-AS1Q96KT0 104 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 PFDN5Q99471 154 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 IL36BQ9NZH7 164 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 GGTLC3B5MD39 225 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 LGALS7P47929 136 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 CNN1P51911 297 aaKnown RBP7.61□□□□□ -1.19
PDPN-212ENST00000621990 PRSS8Q16651 343 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 TGIF2LXQ8IUE1 241 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 OR2T6Q8NHC8 308 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 SLC25A2Q9BXI2 301 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 TMEM133Q9H2Q1 129 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 ZMAT5Q9UDW3 170 aaKnown RBP7.61□□□□□ -1.19
PDPN-212ENST00000621990 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
PDPN-212ENST00000621990 IGKV1D-37A0A075B6S9 117 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 PAX1P15863 534 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 SUB1P53999 127 aaKnown RBP eCLIP7.6□□□□□ -1.19
PDPN-212ENST00000621990 FBXL19-AS1Q494R0 122 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 FNDC4Q9H6D8 234 aaPredicted RBP7.6□□□□□ -1.19
PDPN-212ENST00000621990 ROS1P08922 2347 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 TRAV20A0A0B4J274 112 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 IGLV1-47P01700 117 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 GZMBP10144 247 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 VMA21Q3ZAQ7 101 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 CENPWQ5EE01 88 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 V9GYV3 84 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 PCNX1Q96RV3 2341 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 CEP295Q9C0D2 2601 aa7.6□□□□□ -1.19
PDPN-212ENST00000621990 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.59□□□□□ -1.19
PDPN-212ENST00000621990 TCRBV4S1A1TA0A5B7 111 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 HELTA6NFD8 242 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 OR7C2O60412 319 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 RBP4P02753 201 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 CRYGBP07316 175 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 CD3EP07766 207 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 CRYBB3P26998 211 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 GNG4P50150 75 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 LGALS4P56470 323 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 SELENOTP62341 195 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 FOXC1Q12948 553 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 C10orf55Q5SWW7 151 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 ZNF841Q6ZN19 808 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 GBGT1Q8N5D6 347 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 TEX45Q8NA69 505 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 RITA1Q96K30 269 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 IGF2BP2-AS1Q96M15 143 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 DNAJC4Q9NNZ3 241 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 A0A1W2PPI3 338 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms