RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TRAV13-1A0A0B4J241 112 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 TAX1BP3O14907 124 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 FHL5Q5TD97 284 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 LINC00305Q7Z4B0 112 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 EGR4Q05215 589 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 MOGAT3Q86VF5 341 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 CELA3BP08861 270 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 TAF1LQ8IZX4 1826 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 C8orf88P0DMB2 117 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 ANOS1P23352 680 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF441Q8N8Z8 693 aa4.23□□□□□ -1.73
VPS13D-214ENST00000620676 TRPM7Q96QT4 1865 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 ERVK11-1P61568 191 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 NABP1Q96AH0 204 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 STRADBQ9C0K7 418 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 EGLN1Q9GZT9 426 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 SCN4AP35499 1836 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF296Q8WUU4 475 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TWSG1Q9GZX9 223 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 UBE2ZQ9H832 354 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-214ENST00000620676 PGPEP1Q9NXJ5 209 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TNFSF14O43557 240 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 FGFBP3Q8TAT2 258 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 SPINT1O43278 529 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 IGFBP3P17936 291 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TUSC5Q8IXB3 177 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 CCL17Q92583 94 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 IGHV2-26A0A0B4J1V2 119 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 IGKV3D-20A0A0C4DH25 116 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 IGKV1-9A0A0C4DH69 117 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 RND2P52198 227 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF837Q96EG3 531 aaPredicted RBP4.22□□□□□ -1.73
VPS13D-214ENST00000620676 FAM208BQ5VWN6 2430 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 A0A0U1RRA0 63 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 PRSS29PA6NIE9 313 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 FKBP2P26885 142 aaKnown RBP4.22□□□□□ -1.73
VPS13D-214ENST00000620676 SLC25A53Q5H9E4 307 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 MDP1Q86V88 176 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 FBXL15Q9H469 300 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 WNT2P09544 360 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TMEM249Q2WGJ8 235 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 PRNDQ9UKY0 176 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 WNK1Q9H4A3 2382 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 PFN1P07737 140 aaKnown RBP4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TNFSF15O95150 251 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 DOCK9Q9BZ29 2069 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 H3BRM9 83 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TTC9CQ8N5M4 171 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 CHAC1Q9BUX1 264 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 QRFPP83859 136 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 GPR82Q96P67 336 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 TNFRSF4P43489 277 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 COQ2Q96H96 371 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 PLA2G2FQ9BZM2 168 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 RAXQ9Y2V3 346 aa4.22□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF726P1Q15940 193 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 LRRC10Q5BKY1 277 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 OR9G1Q8NH87 305 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 ABHD17AQ96GS6 310 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 ANKRD31Q8N7Z5 1873 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 A0A1W2PPC4 97 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 FOXI3A8MTJ6 420 aaPredicted RBP4.21□□□□□ -1.73
VPS13D-214ENST00000620676 FAM166AQ6J272 317 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 Q6ZRM9 215 aa4.21□□□□□ -1.73
VPS13D-214ENST00000620676 E9PQ18 207 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 PSG4Q00888 419 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 DPM2O94777 84 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 MYOD1P15172 320 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 ZNF645Q8N7E2 425 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 A0A1W2PQM1 296 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 WISP1O95388 367 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 MGST2Q99735 147 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 QSER1Q2KHR3 1735 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV3A0A0B4J244 114 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 IGHV2OR16-5A0A0B4J2B6 119 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 CISD3P0C7P0 127 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 DCAF12Q5T6F0 453 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 FGF14Q92915 247 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 OCIAD1Q9NX40 245 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 TRAV1-1A0A0B4J248 108 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 G3V4G9 280 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 TMEM56-RWDD3S4R434 201 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 CCL7P80098 99 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 PCP2Q8IVA1 136 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 YAE1D1Q9NRH1 226 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 EXOC3-AS1Q8N2X6 119 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 ZP4Q12836 540 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 AGBL5Q8NDL9 886 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 C1QTNF4Q9BXJ3 329 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 DLL3Q9NYJ7 618 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 DOCK5Q9H7D0 1870 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 A0A1B0GUT8 65 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 CD27P26842 260 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 CFHR2P36980 270 aa4.21□□□□□ -1.74
VPS13D-214ENST00000620676 VMA21Q3ZAQ7 101 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms