RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 HINT2Q9BX68 163 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 PLEKHA3Q9HB20 300 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 BATF3Q9NR55 127 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 PTTG2Q9NZH5 202 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 CACFD1Q9UGQ2 172 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 ZNF256Q9Y2P7 627 aaPredicted RBP6.27□□□□□ -1.41
NEK3-209ENST00000618856 DNAH7Q8WXX0 4024 aa6.27□□□□□ -1.41
NEK3-209ENST00000618856 TGOLN2O43493 480 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 OR2C1O95371 312 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 SFT2D2O95562 160 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 IGHV3-23P01764 117 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 CTSGP08311 255 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 RNASE2P10153 161 aaKnown RBP6.26□□□□□ -1.41
NEK3-209ENST00000618856 SLC25A6P12236 298 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 ADMP35318 185 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 ARL3P36405 182 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
NEK3-209ENST00000618856 ERHP84090 104 aaKnown RBP6.26□□□□□ -1.41
NEK3-209ENST00000618856 PPP1R1AQ13522 171 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 ANKRD55Q3KP44 614 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 SPSB3Q6PJ21 355 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 LGI3Q8N145 548 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 CENPSQ8N2Z9 138 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 OR2K2Q8NGT1 345 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 MRAPQ8TCY5 172 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 TMEM170AQ8WVE7 144 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 OR4C12Q96R67 309 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 ZC4H2Q9NQZ6 224 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 C21orf62Q9NYP8 219 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 PEMTQ9UBM1 199 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 HSPB7Q9UBY9 170 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 CACNG5Q9UF02 275 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 S4R3C0 116 aa6.26□□□□□ -1.41
NEK3-209ENST00000618856 A0A1B0GU03 582 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 TMEM213A2RRL7 107 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 C2orf70A6NJV1 201 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 CENPXA8MT69 81 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 IFNA17P01571 189 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 SULT1A3P0DMM9 295 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 SULT1A4P0DMN0 295 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 SPNP16150 400 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 GPR183P32249 361 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 SMCO1Q147U7 214 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 C2orf83Q53S99 150 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
NEK3-209ENST00000618856 UNQ9165/PRO28630Q6UXU0 137 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 TMED4Q7Z7H5 227 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 Q8N1Y9 231 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 S100ZQ8WXG8 99 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 TMEM190Q8WZ59 177 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 CHRDL1Q9BU40 450 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 GAR1Q9NY12 217 aaKnown RBP6.25□□□□□ -1.41
NEK3-209ENST00000618856 TMED3Q9Y3Q3 217 aa6.25□□□□□ -1.41
NEK3-209ENST00000618856 C9orf170A2RU37 121 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 A8MZ25 164 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 FAM90A26D6RGX4 464 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 K7EMT4 169 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 CORTO00230 105 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 NDUFA4O00483 81 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 LYRM1O43325 122 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 MT-CO2P00403 227 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 OR4E1P0C645 316 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 FOLR2P14207 255 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 GP9P14770 177 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 EDN2P20800 178 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 CBLN1P23435 193 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 HTR2BP41595 481 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 SUB1P53999 127 aaKnown RBP eCLIP6.24□□□□□ -1.41
NEK3-209ENST00000618856 ATP5IP56385 69 aaPredicted RBP6.24□□□□□ -1.41
NEK3-209ENST00000618856 TNFRSF9Q07011 255 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 DHRS2Q13268 280 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 DCTN2Q13561 401 aaKnown RBP6.24□□□□□ -1.41
NEK3-209ENST00000618856 DEFB114Q30KQ6 69 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 FAM106AQ4KMX7 169 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 SPINK9Q5DT21 86 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 PLET1Q6UQ28 207 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 MARC2Q969Z3 335 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 OR10C1Q96KK4 312 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 PRR25Q96S07 402 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 B9D2Q9BPU9 175 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 PDCD10Q9BUL8 212 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 FNDC4Q9H6D8 234 aaPredicted RBP6.24□□□□□ -1.41
NEK3-209ENST00000618856 TECRQ9NZ01 308 aaKnown RBP6.24□□□□□ -1.41
NEK3-209ENST00000618856 TBC1D24Q9ULP9 559 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 FLVCR2Q9UPI3 526 aa6.24□□□□□ -1.41
NEK3-209ENST00000618856 SORL1Q92673 2214 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 OR2T8A6NH00 312 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 ZNF785A8K8V0 405 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 VAMP1P23763 118 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 SNCAP37840 140 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 INPP1P49441 399 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 HOXA1P49639 335 aaPredicted RBP6.23□□□□□ -1.41
NEK3-209ENST00000618856 MFAP4P55083 255 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 IFITM3Q01628 133 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 ASAH1Q13510 395 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 LYG2Q86SG7 212 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 HAPLN4Q86UW8 402 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 OR4X1Q8NH49 305 aa6.23□□□□□ -1.41
NEK3-209ENST00000618856 RNASE11Q8TAA1 199 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms