RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 MUC21A0A0G2JKD1 596 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 MUC21A0A140T8X8 626 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 IGKV1D-16P01601 117 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 IGKCP01834 107 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 CXCL10P02778 98 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 HIST1H4AP62805 103 aaKnown RBP9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 MUC21Q5SSG8 566 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 ITLN1Q8WWA0 313 aa9.79□□□□□ -0.84
PCDHA4-204ENST00000618834 ASPHD2Q6ICH7 369 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 DLX4Q92988 240 aaPredicted RBP9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 TUBA4BQ9H853 241 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 JPT1Q9UK76 154 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 FAM89BQ8N5H3 189 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 SEPSECSQ9HD40 501 aaKnown RBP9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 TMEM171Q8WVE6 324 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 AHDC1Q5TGY3 1603 aaPredicted RBP9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 NBEAP1P0C6P0 100 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 ABHD12Q8N2K0 398 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 CD200R1LQ6Q8B3 271 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 DEFB124Q8NES8 71 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 ATXN7O15265 892 aaPredicted RBP9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 PRSS53Q2L4Q9 553 aa9.78□□□□□ -0.84
PCDHA4-204ENST00000618834 TSPAN7P41732 249 aa9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 ZNF784Q8NCA9 323 aaPredicted RBP9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 NPIPB3Q92617 1050 aa9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 DTX4Q9Y2E6 619 aa9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 SHANK3Q9BYB0 1731 aa9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 TBX6O95947 436 aaPredicted RBP9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 ZNF826PQ6ZT77 177 aa9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 FAM181AQ8N9Y4 354 aa9.77□□□□□ -0.84
PCDHA4-204ENST00000618834 CCL21O00585 134 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 NDUFA2O43678 99 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 IL11P20809 199 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 ZNF48Q96MX3 618 aaPredicted RBP9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 SPANXA1Q9NS26 97 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 DENND4CQ5VZ89 1909 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 TPTE2P1Q5T6R2 138 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 TMEM86BQ8N661 226 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 TMEM186Q96B77 213 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 TMEM238C9JI98 176 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 EGR1P18146 543 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 PNKDQ8N490 385 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 IGHMP01871 453 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 OR9G4Q8NGQ1 327 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 RNASE7Q9H1E1 156 aaKnown RBP9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 HS3ST3B1Q9Y662 390 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 ORMDL2Q53FV1 153 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 S100A7L2Q5SY68 101 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 GTSF1LQ9H1H1 148 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 DRAM1Q8N682 238 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 OR10W1Q8NGF6 305 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 PLA2G2FQ9BZM2 168 aa9.77□□□□□ -0.85
PCDHA4-204ENST00000618834 OR9G1Q8NH87 305 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 NRTNQ99748 197 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 YBX2Q9Y2T7 364 aaKnown RBP9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 PRR14LQ5THK1 2151 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 TMPRSS3P57727 454 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 RPL39P5Q59GN2 51 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 JMJD8Q96S16 334 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 LHX8Q68G74 356 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 IGKV3D-20A0A0C4DH25 116 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 ZIC3O60481 467 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 LAGE3Q14657 143 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 ATRAIDQ6UW56 229 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 LOC105371242A0A075B767 164 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 IGHV1OR15-9A0A0B4J2B8 117 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 ZNF362Q5T0B9 420 aaPredicted RBP9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 OR52E5Q8NH55 327 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 SCARF2Q96GP6 870 aaPredicted RBP9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 CENPVL1A0A0U1RR11 272 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
PCDHA4-204ENST00000618834 DSCAML1Q8TD84 2053 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 IGHV3-66A0A0C4DH42 116 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 MRAPQ8TCY5 172 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 ASCL2Q99929 193 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 C2orf16Q68DN1 1984 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 IGKV1D-42A0A075B6H8 117 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 CD28P10747 220 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 ZP1P60852 638 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 SLC25A47Q6Q0C1 308 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 A0A1W2PPV9 198 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 FOXA2Q9Y261 457 aaPredicted RBP9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 NHSL1Q5SYE7 1610 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 COL18A1P39060 1754 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 IGFBP2P18065 325 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 IFI27L2Q9H2X8 130 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 SPINT1O43278 529 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 TNFSF13O75888 250 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 C1orf210Q8IVY1 113 aa9.75□□□□□ -0.85
PCDHA4-204ENST00000618834 MAFAQ8NHW3 353 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms