RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 OR52B4Q8NGK2 314 aa16.41■□□□□ 0.22
TRAF4-217ENST00000618771 OR4C16Q8NGL9 310 aa16.41■□□□□ 0.22
TRAF4-217ENST00000618771 ISOC1Q96CN7 298 aa16.41■□□□□ 0.22
TRAF4-217ENST00000618771 C20orf24Q9BUV8 137 aa16.41■□□□□ 0.22
TRAF4-217ENST00000618771 SLIRPQ9GZT3 109 aaKnown RBP16.41■□□□□ 0.22
TRAF4-217ENST00000618771 C14orf166Q9Y224 244 aaKnown RBP16.41■□□□□ 0.22
TRAF4-217ENST00000618771 A0A0B4J293 547 aa16.4■□□□□ 0.22
TRAF4-217ENST00000618771 SURF2Q15527 256 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-217ENST00000618771 ANKRD55Q3KP44 614 aa16.4■□□□□ 0.22
TRAF4-217ENST00000618771 RBPMS2Q6ZRY4 209 aaKnown RBP16.4■□□□□ 0.22
TRAF4-217ENST00000618771 PDCD10Q9BUL8 212 aa16.4■□□□□ 0.22
TRAF4-217ENST00000618771 BIRC6Q9NR09 4857 aa16.4■□□□□ 0.22
TRAF4-217ENST00000618771 RBMY1BA6NDE4 496 aaKnown RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 RBMY1EA6NEQ0 496 aaKnown RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 ST8SIA3O43173 380 aa16.39■□□□□ 0.21
TRAF4-217ENST00000618771 MT-CO2P00403 227 aa16.39■□□□□ 0.21
TRAF4-217ENST00000618771 IFNA17P01571 189 aa16.39■□□□□ 0.21
TRAF4-217ENST00000618771 CTSGP08311 255 aa16.39■□□□□ 0.21
TRAF4-217ENST00000618771 RBMY1DP0C7P1 496 aaKnown RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 MFAP4P55083 255 aa16.39■□□□□ 0.21
TRAF4-217ENST00000618771 RNASE11Q8TAA1 199 aaKnown RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 PINX1Q96BK5 328 aaKnown RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 RRNAD1Q96FB5 475 aaKnown RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 RTBDNQ9BSG5 229 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-217ENST00000618771 C5orf66Q9H5L9 145 aa16.39■□□□□ 0.21
TRAF4-217ENST00000618771 IGHV3OR16-8A0A075B7F1 116 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 TEX13DA0A0J9YY54 714 aaPredicted RBP16.38■□□□□ 0.21
TRAF4-217ENST00000618771 LCE6AA0A183 80 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 NUPL2O15504 423 aaKnown RBP16.38■□□□□ 0.21
TRAF4-217ENST00000618771 GSTZ1O43708 216 aaPredicted RBP16.38■□□□□ 0.21
TRAF4-217ENST00000618771 OR5AC1P0C628 307 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 FCGR2BP31994 310 aaPredicted RBP16.38■□□□□ 0.21
TRAF4-217ENST00000618771 SNCAP37840 140 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 TXN2Q99757 166 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 PRRT1Q99946 306 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 TMEM222Q9H0R3 208 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 RSL24D1Q9UHA3 163 aaKnown RBP16.38■□□□□ 0.21
TRAF4-217ENST00000618771 CSMD3Q7Z407 3707 aa16.38■□□□□ 0.21
TRAF4-217ENST00000618771 DNAH1Q9P2D7 4330 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 A0A0G2JRQ6 117 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 INS-IGF2F8WCM5 200 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 K7EMT4 169 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 IGHV3-48P01763 117 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 RELQ04864 619 aaPredicted RBP16.37■□□□□ 0.21
TRAF4-217ENST00000618771 ZFAND6Q6FIF0 208 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 OR51S1Q8NGJ8 323 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 MCFD2Q8NI22 146 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 HIPK2Q9H2X6 1198 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 NAA60Q9H7X0 242 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 EDA2RQ9HAV5 297 aa16.37■□□□□ 0.21
TRAF4-217ENST00000618771 ANKRD20A5PA0PJZ0 165 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 C15orf62A8K5M9 175 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 ZNF207O43670 478 aaKnown RBP16.36■□□□□ 0.21
TRAF4-217ENST00000618771 CDS2O95674 445 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 TNFSF8P32971 234 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 HOXA1P49639 335 aaPredicted RBP16.36■□□□□ 0.21
TRAF4-217ENST00000618771 GLYATL2Q8WU03 294 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 SPAG8Q99932 426 aaPredicted RBP16.36■□□□□ 0.21
TRAF4-217ENST00000618771 RETNQ9HD89 108 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 GPR132Q9UNW8 380 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 STARD9Q9P2P6 4700 aa16.36■□□□□ 0.21
TRAF4-217ENST00000618771 FABP12A6NFH5 140 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 GNG7O60262 68 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 ETV6P41212 452 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 FAM219AQ8IW50 185 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 RBPMSQ93062 196 aaKnown RBP16.35■□□□□ 0.21
TRAF4-217ENST00000618771 ZNF414Q96IQ9 312 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 NXF2Q9GZY0 626 aaKnown RBP16.35■□□□□ 0.21
TRAF4-217ENST00000618771 ENY2Q9NPA8 101 aa16.35■□□□□ 0.21
TRAF4-217ENST00000618771 TSPAN4O14817 238 aa16.34■□□□□ 0.21
TRAF4-217ENST00000618771 SUB1P53999 127 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRAF4-217ENST00000618771 DHODHQ02127 395 aa16.34■□□□□ 0.21
TRAF4-217ENST00000618771 LAMTOR1Q6IAA8 161 aa16.34■□□□□ 0.21
TRAF4-217ENST00000618771 Q6ZRM9 215 aa16.34■□□□□ 0.21
TRAF4-217ENST00000618771 SOSTQ9BQB4 213 aa16.34■□□□□ 0.21
TRAF4-217ENST00000618771 CRYM-AS1A6NIL9 109 aa16.33■□□□□ 0.2
TRAF4-217ENST00000618771 YIF1AO95070 293 aa16.33■□□□□ 0.2
TRAF4-217ENST00000618771 RNASE2P10153 161 aaKnown RBP16.33■□□□□ 0.2
TRAF4-217ENST00000618771 DUSP18Q8NEJ0 188 aa16.33■□□□□ 0.2
TRAF4-217ENST00000618771 FAM110AQ9BQ89 295 aa16.33■□□□□ 0.2
TRAF4-217ENST00000618771 SCP2D1Q9UJQ7 156 aa16.33■□□□□ 0.2
TRAF4-217ENST00000618771 CORTO00230 105 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 NPBWR1P48145 328 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 TMEM268Q5VZI3 342 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 PVRIGQ6DKI7 326 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 SELENOHQ8IZQ5 122 aaKnown RBP16.32■□□□□ 0.2
TRAF4-217ENST00000618771 OR10C1Q96KK4 312 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-217ENST00000618771 MCUBQ9NWR8 336 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 SMPXQ9UHP9 88 aa16.32■□□□□ 0.2
TRAF4-217ENST00000618771 IGHV7-4-1A0A0J9YVY3 117 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 CCDC160A6NGH7 325 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 SPCS3P61009 180 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 AARDQ4LEZ3 155 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 SCGB3A2Q96PL1 93 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 GGTLC1Q9BX51 225 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 CACNG5Q9UF02 275 aa16.31■□□□□ 0.2
TRAF4-217ENST00000618771 TMEM116Q8NCL8 245 aa16.3■□□□□ 0.2
TRAF4-217ENST00000618771 OR52E5Q8NH55 327 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms