RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CD74P04233 296 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 FCGR3AP08637 254 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 CGB3P0DN86 165 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 CGB7P0DN87 165 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 ESDP10768 282 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 DUSP1P28562 367 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 SULT1A1P50225 295 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 RBM39Q14498 530 aaKnown RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 EDDM3AQ14507 147 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 CDK5R1Q15078 307 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 TMEM177Q53S58 311 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 TPTE2P1Q5T6R2 138 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 GLDNQ6ZMI3 551 aaPredicted RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 ZNF705AQ6ZN79 300 aaPredicted RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 TRAPPC6BQ86SZ2 158 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 FAM24BQ8N5W8 94 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 OR51A4Q8NGJ6 313 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 OR52I1Q8NGK6 324 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 IMMP2LQ96T52 175 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 SLC45A2Q9UMX9 530 aa6.79□□□□□ -1.32
GPC6-202ENST00000617456 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 AMMECR1Q9Y4X0 333 aaPredicted RBP6.79□□□□□ -1.32
GPC6-202ENST00000617456 A0A1B0GW64 132 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 KANTRA0A1W2PQU2 76 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 LY6LH3BQJ8 138 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 BUB1B-PAK6H3BSN5 160 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 CD1AP06126 327 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 SFTA3P0C7M3 94 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 LIMS3P0CW19 117 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 LIMS4P0CW20 117 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 CDK2P24941 298 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 RPS10P46783 165 aaKnown RBP6.78□□□□□ -1.32
GPC6-202ENST00000617456 MLLT11Q13015 90 aaPredicted RBP6.78□□□□□ -1.32
GPC6-202ENST00000617456 GAGE5Q13069 117 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 GAGE6Q13070 117 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 HLA-DRB5Q30154 266 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 TMEM41BQ5BJD5 291 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 C10orf99Q6UWK7 81 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 IZUMO1Q8IYV9 350 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 CMTM1Q8IZ96 169 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 C8orf31Q8N9H6 132 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 OR4X2Q8NGF9 303 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 OR9G1Q8NH87 305 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 TMEM18Q96B42 140 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 RNF125Q96EQ8 232 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 ASCL2Q99929 193 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 CHST6Q9GZX3 395 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 ISG20L2Q9H9L3 353 aaKnown RBP6.78□□□□□ -1.32
GPC6-202ENST00000617456 RAB9BQ9NP90 201 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 IL36RNQ9UBH0 155 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 PSG8Q9UQ74 426 aa6.78□□□□□ -1.32
GPC6-202ENST00000617456 LSM2Q9Y333 95 aaKnown RBP6.78□□□□□ -1.32
GPC6-202ENST00000617456 FAM90A18PA6NE21 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A16PA6NEW6 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A20PA6NIJ5 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 SH2D7A6NKC9 451 aaPredicted RBP6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A9PA6NNJ1 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A12PA8MX19 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A5PA8MXJ8 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 NPIPB11E5RHQ5 1161 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 C3orf84H3BNL1 204 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 SIRPB1O00241 398 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 SCGNO76038 276 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 S1PR2O95136 353 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 MBPP02686 304 aaPredicted RBP6.77□□□□□ -1.33
GPC6-202ENST00000617456 CRYGBP07316 175 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A15PP0C7V4 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A13PP0C7W8 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A14PP0C7W9 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM90A24PP0C7X0 464 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
GPC6-202ENST00000617456 FAM106CPP0CH98 169 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 CD24P25063 80 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 GLIPR1P48060 266 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 MPV17LQ2QL34 196 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 TMEM30BQ3MIR4 351 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 CD200R1LQ6Q8B3 271 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 NEGR1Q7Z3B1 354 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 OR1P1Q8NH06 330 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 OR10AC1Q8NH08 325 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 SMIM19Q96E16 107 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 COQ2Q96H96 371 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 KCTD7Q96MP8 289 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 PDCD1LG2Q9BQ51 273 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 PSMG3Q9BT73 122 aaPredicted RBP6.77□□□□□ -1.33
GPC6-202ENST00000617456 TAS2R8Q9NYW2 309 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 FLVCR2Q9UPI3 526 aa6.77□□□□□ -1.33
GPC6-202ENST00000617456 AK6Q9Y3D8 172 aaKnown RBP6.77□□□□□ -1.33
GPC6-202ENST00000617456 RYR2Q92736 4967 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 TRAV24A0A0B4J272 114 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 ZNF705GA8MUZ8 300 aaPredicted RBP6.76□□□□□ -1.33
GPC6-202ENST00000617456 H3BSH0 61 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 GABRPO00591 440 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
GPC6-202ENST00000617456 CDRT1O95170 752 aa6.76□□□□□ -1.33
GPC6-202ENST00000617456 OR2C1O95371 312 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms