RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 KIR3DL3Q8N743 410 aa16.58■□□□□ 0.24
CNTNAP3B-212ENST00000617422 OR10P1Q8NGE3 313 aa16.58■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TMEM167AQ8TBQ9 72 aa16.58■□□□□ 0.24
CNTNAP3B-212ENST00000617422 C10orf105Q8TEF2 133 aa16.58■□□□□ 0.24
CNTNAP3B-212ENST00000617422 VSIRQ9H7M9 311 aa16.58■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ZNF257Q9Y2Q1 563 aa16.58■□□□□ 0.24
CNTNAP3B-212ENST00000617422 COX6B1P14854 86 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 HOXB4P17483 251 aaPredicted RBP16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PRCDQ00LT1 54 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 C10orf55Q5SWW7 151 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TPTE2P1Q5T6R2 138 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 HIST3H2BBQ8N257 126 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 OR10W1Q8NGF6 305 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 FAM168AQ92567 244 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 AMMECR1Q9Y4X0 333 aaPredicted RBP16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 HILPDAQ9Y5L2 63 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 MAP1LC3B2A6NCE7 125 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CGB1A6NKQ9 187 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 HTR1DP28221 377 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 FBLN7Q53RD9 439 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PERPQ96FX8 193 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 MAP1LC3BQ9GZQ8 125 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ZNF430Q9H8G1 570 aaPredicted RBP16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 LPAR2Q9HBW0 351 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ZFHX3Q15911 3703 aa16.57■□□□□ 0.24
CNTNAP3B-212ENST00000617422 VWC2LB2RUY7 222 aa16.56■□□□□ 0.24
CNTNAP3B-212ENST00000617422 RPL8P62917 257 aaKnown RBP16.56■□□□□ 0.24
CNTNAP3B-212ENST00000617422 DYNAPQ8N1N2 210 aa16.56■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TAF15Q92804 592 aaKnown RBP eCLIP16.56■□□□□ 0.24
CNTNAP3B-212ENST00000617422 NAV3Q8IVL0 2385 aa16.56■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PTPN13Q12923 2485 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 IGHV4-30-2A0A087WSY4 118 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TIMM23O14925 209 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TRGC1P0CF51 173 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 VWC2Q2TAL6 325 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 LINC00469Q8N7U9 141 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 OR10D4PQ8NGN7 298 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PFDN5Q99471 154 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TMEM147Q9BVK8 224 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 DPM3Q9P2X0 92 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 NBPF19A0A087WUL8 3843 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 NDUFS6O75380 124 aaKnown RBP16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CA2P00918 260 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 USF1P22415 310 aaPredicted RBP16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 FGF8P55075 233 aaPredicted RBP16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CENPVQ7Z7K6 275 aaPredicted RBP16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TBX15Q96SF7 602 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 NDUFA4L2Q9NRX3 87 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 NAT8Q9UHE5 227 aa16.55■□□□□ 0.24
CNTNAP3B-212ENST00000617422 MDKP21741 143 aaPredicted RBP16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 SSX7Q7RTT5 188 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 SLC24A4Q8NFF2 622 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 OR5B3Q8NH48 314 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CFHR4Q92496 578 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 SLC39A9Q9NUM3 307 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CRYGBP07316 175 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ATP6V1FQ16864 119 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ABHD5Q8WTS1 349 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 FRZBQ92765 325 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PIMREGQ9BSJ6 248 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PLEKHA3Q9HB20 300 aa16.54■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ANKRD17O75179 2603 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CD24P25063 80 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 LGALS7P47929 136 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 KRTAP10-9P60411 292 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ABCA12Q86UK0 2595 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 LY86O95711 162 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 MBP02144 154 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 HIST1H1BP16401 226 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 NPY1RP25929 384 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PSG5Q15238 335 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 CYP2G1PQ6ZSU1 146 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 OR4A5Q8NH83 315 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 VSTM2AQ8TAG5 236 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 GPR61Q9BZJ8 451 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 COMMD5Q9GZQ3 224 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 FKBP11Q9NYL4 201 aa16.53■□□□□ 0.24
CNTNAP3B-212ENST00000617422 TOX4O94842 621 aa16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 VENTXO95231 258 aa16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ELLP55199 621 aaPredicted RBP16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 VMA21Q3ZAQ7 101 aa16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 C1orf159Q96HA4 380 aa16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 ENY2Q9NPA8 101 aa16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PITPNC1Q9UKF7 332 aa16.52■□□□□ 0.24
CNTNAP3B-212ENST00000617422 PHOX2AO14813 284 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 RPP30P78346 268 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 MEF2BQ02080 365 aaPredicted RBP16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 SSX2Q16385 188 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 CLEC2AQ6UVW9 174 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 OR1L8Q8NGR8 309 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 AJUBAQ96IF1 538 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 TMEM250H0YL14 139 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 FGF7P21781 194 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 WT1-ASQ06250 92 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 TMEM241Q24JQ0 296 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 BSXQ3C1V8 233 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 SMIM7Q9BQ49 75 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 SIGLEC9Q9Y336 463 aa16.51■□□□□ 0.23
CNTNAP3B-212ENST00000617422 FOXH1O75593 365 aa16.5■□□□□ 0.23
CNTNAP3B-212ENST00000617422 PSMB3P49720 205 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms