RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MS4A10Q96PG2 267 aa11.53□□□□□ -0.56
UBXN1-218ENST00000616865 PAIP2BQ9ULR5 123 aaKnown RBP11.53□□□□□ -0.56
UBXN1-218ENST00000616865 TNCP24821 2201 aa11.52□□□□□ -0.56
UBXN1-218ENST00000616865 H3BUA1 57 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 ELANEP08246 267 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.57
UBXN1-218ENST00000616865 CTRB1P17538 263 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 CXCL3P19876 107 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 PPIFP30405 207 aaKnown RBP11.52□□□□□ -0.57
UBXN1-218ENST00000616865 HTR2BP41595 481 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 H2BFSP57053 126 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 TPPP2P59282 170 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 CFHR3Q02985 330 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 LRRC37A5PQ49AS3 106 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 CTRB2Q6GPI1 263 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 C18orf65Q6ZTR6 163 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 OR11H7Q8NGC8 314 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 P2RX4Q99571 388 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 ZNF436Q9C0F3 470 aaPredicted RBP11.52□□□□□ -0.57
UBXN1-218ENST00000616865 SLA2Q9H6Q3 261 aa11.52□□□□□ -0.57
UBXN1-218ENST00000616865 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
UBXN1-218ENST00000616865 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.57
UBXN1-218ENST00000616865 NUDT19A8MXV4 375 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 INS-IGF2F8WCM5 200 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 K7EPK0 472 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 PRH1P02810 166 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 CRYGCP07315 174 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 PET100P0DJ07 73 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 MYCNOSP40205 109 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 RAB32Q13637 225 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 MISP3Q96FF7 219 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 PSENENQ9NZ42 101 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 THYN1Q9P016 225 aa11.51□□□□□ -0.57
UBXN1-218ENST00000616865 ZMAT5Q9UDW3 170 aaKnown RBP11.51□□□□□ -0.57
UBXN1-218ENST00000616865 SOX15O60248 233 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 GIPP09681 153 aaPredicted RBP11.5□□□□□ -0.57
UBXN1-218ENST00000616865 NHLRC4P0CG21 123 aaPredicted RBP11.5□□□□□ -0.57
UBXN1-218ENST00000616865 NPY1RP25929 384 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 RAB9AP51151 201 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 BCAP31P51572 246 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 RAB11AP62491 216 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 OR1P1Q8NH06 330 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 FBXL7Q9UJT9 491 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
UBXN1-218ENST00000616865 U3KQ87 197 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 U3KQK5 164 aa11.5□□□□□ -0.57
UBXN1-218ENST00000616865 RYR2Q92736 4967 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 A0A0G2JLM5 398 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 OR2J3O76001 311 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 IFNA4P05014 189 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 OR8U8P0C7N1 319 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 RNASE2P10153 161 aaKnown RBP11.49□□□□□ -0.57
UBXN1-218ENST00000616865 PSMB8P28062 276 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 ATP5IP56385 69 aaPredicted RBP11.49□□□□□ -0.57
UBXN1-218ENST00000616865 RAP2BP61225 183 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 RHOGP84095 191 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 PPP1R1CQ8WVI7 109 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 SMIM8Q96KF7 97 aa11.49□□□□□ -0.57
UBXN1-218ENST00000616865 H3BP45 60 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 CORTO00230 105 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 RPLP1P05386 114 aaKnown RBP11.48□□□□□ -0.57
UBXN1-218ENST00000616865 TAS2R30P59541 319 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 FGL1Q08830 312 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 THAP6Q8TBB0 222 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 PINX1Q96BK5 328 aaKnown RBP11.48□□□□□ -0.57
UBXN1-218ENST00000616865 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 KLK15Q9H2R5 256 aa11.48□□□□□ -0.57
UBXN1-218ENST00000616865 LSM4Q9Y4Z0 139 aaKnown RBP11.48□□□□□ -0.57
UBXN1-218ENST00000616865 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 E5RGE8 158 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 DEDDO75618 318 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 BRI3O95415 125 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 CAV2P51636 162 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 DEFA5Q01523 94 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 IL15RAQ13261 267 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
UBXN1-218ENST00000616865 RAX2Q96IS3 184 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
UBXN1-218ENST00000616865 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
UBXN1-218ENST00000616865 TRBV9A0A0B4J1U6 114 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 TSC22D2O75157 780 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 NDUFB8O95169 186 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 MPC2O95563 127 aa11.46□□□□□ -0.57
UBXN1-218ENST00000616865 OPRK1P41145 380 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms