RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TMEM106BQ9NUM4 274 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF106Q9H2Y7 1883 aaKnown RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 YLPM1P49750 1951 aaKnown RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 K7EQM0 130 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 PROP1O75360 226 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 CGAP01215 116 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGHV1-46P01743 117 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 TIMP3P35625 211 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 ETFRF1Q6IPR1 90 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 NUP210Q8TEM1 1887 aaPredicted RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 ANKRD17O75179 2603 aaKnown RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 C20orf202A1L168 122 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 GRIFINA4D1Z8 144 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 DOLPP1Q86YN1 238 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR1L4Q8NGR5 311 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 RNF2Q99496 336 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 LINC00312Q9Y6C7 94 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 SLC17A3O00476 420 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 HYPMO75409 117 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 RBP4P02753 201 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 PFN1P07737 140 aaKnown RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 DDTP30046 118 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 CEACAM3P40198 252 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 TPPP2P59282 170 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 CD69Q07108 199 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 WDR73Q6P4I2 378 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 PDPNQ86YL7 162 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 CACNG8Q8WXS5 425 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 IFI27L2Q9H2X8 130 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF430Q9H8G1 570 aaPredicted RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 LAMA1P25391 3075 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 CCKARP32238 428 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 MEF2CQ06413 473 aaPredicted RBP4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 FAM57AQ8TBR7 257 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 DERL1Q9BUN8 251 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 THYN1Q9P016 225 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 DMRT1Q9Y5R6 373 aa4.66□□□□□ -1.66
SYNCRIP-204ENST00000616122 PGPA6NDG6 321 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 C15orf61A6NNL5 157 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 ARF6P62330 175 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 TEX38Q6PEX7 206 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 OCC1Q8TAD7 63 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BLQ99880 126 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 PAXXQ9BUH6 204 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 DKK4Q9UBT3 224 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 WASHC3Q9Y3C0 194 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 DPRXA6NFQ7 191 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGKV1-16P04430 117 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 SAA1P0DJI8 122 aaPredicted RBP4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 COL8A1P27658 744 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 EFNB3Q15768 340 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 C1QL4Q86Z23 238 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 MUC15Q8N387 334 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR52E5Q8NH55 327 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 SCNM1Q9BWG6 230 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 SSBP3Q9BWW4 388 aaPredicted RBP4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 MRPL20Q9BYC9 149 aaKnown RBP4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIF1ANQ9NWT6 349 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 FRYLO94915 3013 aa4.65□□□□□ -1.66
SYNCRIP-204ENST00000616122 H3BTX0 84 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM87AP0C7U9 286 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 NUBP1P53384 320 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 C10orf113Q5VZT2 155 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF596Q8TC21 504 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM222BQ8WU58 562 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 UPK2O00526 184 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 CCL21O00585 134 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 CHEK1O14757 476 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 GNG7O60262 68 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 LYZP61626 148 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 BSPH1Q075Z2 132 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 CENPWQ5EE01 88 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 C11orf53Q8IXP5 236 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM183AQ8IXX5 376 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 NUP37Q8NFH4 326 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM103A1Q9BTL3 118 aaKnown RBP4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 C19orf24Q9BVV8 132 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM215AQ9Y5M1 114 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 TM4SF5O14894 197 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 CSN1S1P47710 185 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 FXYD3Q14802 87 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 IBA57Q5T440 356 aaKnown RBP4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 SNRNP40Q96DI7 357 aaKnown RBP4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 TBX15Q96SF7 602 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 HSPB9Q9BQS6 159 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMUB1Q9BVT8 246 aa4.65□□□□□ -1.67
SYNCRIP-204ENST00000616122 HLA-DQA1P01909 254 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 CD99P14209 185 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 CD33P20138 364 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRCDQ00LT1 54 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF726P1Q15940 193 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 MIR17HGQ75NE6 70 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 A8MWL6 223 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGLV1-44P01699 117 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 NBEAP1P0C6P0 100 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 MYOD1P15172 320 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms