RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 K7EP13 123 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 PROP1O75360 226 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 TNFSF4P23510 183 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 GATA4P43694 442 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 ADIPOQQ15848 244 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 LDLRAD2Q5SZI1 272 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 UHRF2Q96PU4 802 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 RBMXL2O75526 392 aaKnown RBP13.52□□□□□ -0.24
CNOT3-208ENST00000613073 CD99P14209 185 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 RPL39P5Q59GN2 51 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 TRAT1Q6PIZ9 186 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 FAM216BQ8N7L0 139 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 NUP37Q8NFH4 326 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 TIMM9Q9Y5J7 89 aa13.52□□□□□ -0.24
CNOT3-208ENST00000613073 RAI1Q7Z5J4 1906 aaPredicted RBP13.52□□□□□ -0.24
CNOT3-208ENST00000613073 TSPOP30536 169 aa13.52□□□□□ -0.25
CNOT3-208ENST00000613073 CALYQ9NYX4 217 aa13.52□□□□□ -0.25
CNOT3-208ENST00000613073 NAT8BQ9UHF3 227 aa13.52□□□□□ -0.25
CNOT3-208ENST00000613073 TRGV8A0A0C4DH27 118 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 TMPRSS2O15393 492 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 ZG16O60844 167 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 ZNF253O75346 499 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 CLDN14O95500 239 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 C3orf79P0CE67 100 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 LOXL3P58215 753 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 NCOR2Q9Y618 2525 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 PDE6DO43924 150 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 ESDP10768 282 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 TCL1AP56279 114 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 RND1Q92730 232 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 JKAMPQ9P055 326 aa13.51□□□□□ -0.25
CNOT3-208ENST00000613073 FCGR3BO75015 233 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 STUMQ69YW2 141 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 H2BFWTQ7Z2G1 175 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 OR10P1Q8NGE3 313 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 HSD17B10Q99714 261 aaKnown RBP13.5□□□□□ -0.25
CNOT3-208ENST00000613073 JPT1Q9UK76 154 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 TPRP12270 2363 aaKnown RBP13.5□□□□□ -0.25
CNOT3-208ENST00000613073 M0R1X1 148 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 TOMM40O96008 361 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 GAFA1Q96PS6 74 aa13.5□□□□□ -0.25
CNOT3-208ENST00000613073 QTRT1Q9BXR0 403 aaKnown RBP13.5□□□□□ -0.25
CNOT3-208ENST00000613073 A0A1W2PPV4 95 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 LRRC30A6NM36 301 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 DUTP33316 252 aaKnown RBP13.49□□□□□ -0.25
CNOT3-208ENST00000613073 TMPRSS3P57727 454 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 C17orf58Q2M2W7 97 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 FAM222BQ8WU58 562 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 NEUROG1Q92886 237 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 ST6GALNAC6Q969X2 333 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 A0A1W2PS18 150 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 K7EN84 100 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 RELBQ01201 579 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 RBPJQ06330 500 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 VKORC1L1Q8N0U8 176 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.49□□□□□ -0.25
CNOT3-208ENST00000613073 IL36BQ9NZH7 164 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 DSCAML1Q8TD84 2053 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 HCFC1P51610 2035 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 C17orf100A8MU93 164 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 P0C879 139 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 ARL14EPLP0DKL9 152 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 CR1LQ2VPA4 569 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 C16orf54Q6UWD8 224 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 C1orf229Q6ZS94 237 aaPredicted RBP13.49□□□□□ -0.25
CNOT3-208ENST00000613073 SLC35D1Q9NTN3 355 aa13.49□□□□□ -0.25
CNOT3-208ENST00000613073 IGHV2-70DA0A0C4DH43 119 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 F2RL2O00254 374 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 KCNIP2Q9NS61 270 aa13.48□□□□□ -0.25
CNOT3-208ENST00000613073 TRGV10A0A0A0MS01 117 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 PSG1P11464 419 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 SRIP30626 198 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 Q0VG73 95 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 GSX1Q9H4S2 264 aaPredicted RBP13.47□□□□□ -0.25
CNOT3-208ENST00000613073 TANC2Q9HCD6 1990 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 KBTBD11-OT1A0A1B0GTJ5 212 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 CGB3P0DN86 165 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 CGB7P0DN87 165 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 FXYD3Q14802 87 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 ASPHD1Q5U4P2 390 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 TCTEX1D1Q8N7M0 179 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 CCL17Q92583 94 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 KCNS1Q96KK3 526 aa13.47□□□□□ -0.25
CNOT3-208ENST00000613073 FAM90A26D6RGX4 464 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 MMP23AO75900 390 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 TNFRSF1AP19438 455 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 LGALS4P56470 323 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 Q56UQ5 140 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 CT45A1Q5HYN5 189 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 PRR31Q5SQ13 230 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 MRPL54Q6P161 138 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms