RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 CYP2G1PQ6ZSU1 146 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 OR4B1Q8NGF8 309 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 OR10G8Q8NGN5 311 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 SCRT1Q9BWW7 348 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 WDR61Q9GZS3 305 aaKnown RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 IGKV3D-15A0A087WSY6 115 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 IGKV1-12A0A0C4DH73 117 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 NPIPB13A6NJU9 1138 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 C12orf77C9JDV5 145 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 NPIPB4C9JG80 1138 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 IGKV1D-12P01611 117 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 TECRQ9NZ01 308 aaKnown RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 TBL2Q9Y4P3 447 aaKnown RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 LAMA5O15230 3695 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 CD99P14209 185 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 KLRD1Q13241 179 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 RNASEKQ6P5S7 137 aaKnown RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 MOB1BQ7L9L4 216 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 UHRF2Q96PU4 802 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 LIME1Q9H400 295 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 ZNRD1Q9P1U0 126 aa9.02□□□□□ -0.97
FAM3A-221ENST00000612856 E7EQL1 145 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 PFN1P07737 140 aaKnown RBP9.01□□□□□ -0.97
FAM3A-221ENST00000612856 LMO1P25800 156 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 HTR1DP28221 377 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 QRFPP83859 136 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 LCN12Q6JVE5 192 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 ACP7Q6ZNF0 438 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 BLNKQ8WV28 456 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 NACAE9PAV3 2078 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 TRAV40A0A0B4J280 105 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 RELBQ01201 579 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 GAGE1Q13065 139 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 FAM90A1Q86YD7 464 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 OR4S2Q8NH73 311 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 C10orf35Q96D05 121 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 PNRC2Q9NPJ4 139 aaKnown RBP9.01□□□□□ -0.97
FAM3A-221ENST00000612856 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.01□□□□□ -0.97
FAM3A-221ENST00000612856 ZNF835Q9Y2P0 537 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 CEACAM18A8MTB9 384 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 SRSF10O75494 262 aaKnown RBP9.01□□□□□ -0.97
FAM3A-221ENST00000612856 RND2P52198 227 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 ADIPOQQ15848 244 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 FGFRL1Q8N441 504 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 WDR31Q8NA23 367 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 Q96M66 194 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 CFAP47Q6ZTR5 3102 aa9.01□□□□□ -0.97
FAM3A-221ENST00000612856 NBEAQ8NFP9 2946 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 SNAI2O43623 268 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 UBE2V1Q13404 147 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 ZNF818PQ6ZRF7 136 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 OR8I2Q8N0Y5 310 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 KIR3DL3Q8N743 410 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 SLC24A4Q8NFF2 622 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 PLPPR1Q8TBJ4 325 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 SSBP3Q9BWW4 388 aaPredicted RBP9□□□□□ -0.97
FAM3A-221ENST00000612856 PSPNO60542 156 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 GOSR1O95249 250 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 TMEM50AO95807 157 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 LIPFP07098 398 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 CDC34P49427 236 aaPredicted RBP9□□□□□ -0.97
FAM3A-221ENST00000612856 FAM53AQ6NSI3 398 aaPredicted RBP9□□□□□ -0.97
FAM3A-221ENST00000612856 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 TMEM219Q86XT9 240 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 SELENOHQ8IZQ5 122 aaKnown RBP9□□□□□ -0.97
FAM3A-221ENST00000612856 RAB40CQ96S21 281 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 DKK1O94907 266 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 MAS1LP35410 378 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 LYZP61626 148 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 Q6ZWC4 215 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 C1orf174Q8IYL3 243 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 DERL1Q9BUN8 251 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 ZNF430Q9H8G1 570 aaPredicted RBP9□□□□□ -0.97
FAM3A-221ENST00000612856 ITPR3Q14573 2671 aa9□□□□□ -0.97
FAM3A-221ENST00000612856 ANKRD17O75179 2603 aaKnown RBP8.99□□□□□ -0.97
FAM3A-221ENST00000612856 IGKV1-27A0A075B6S5 117 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 PSG1P11464 419 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 F2RP25116 425 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 CAMPP49913 170 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 C1orf162Q8NEQ5 155 aaPredicted RBP8.99□□□□□ -0.97
FAM3A-221ENST00000612856 OR2D3Q8NGH3 330 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 GPR146Q96CH1 333 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 FBXL15Q9H469 300 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 PIGBOS1A0A0B4J2F0 54 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 H3BTX0 84 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 NAPSAO96009 420 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 THBDP07204 575 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 CT45A6P0DMU7 189 aa8.99□□□□□ -0.97
FAM3A-221ENST00000612856 CT45A5P0DMU8 189 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms