RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 S100A7P31151 101 aa7.15□□□□□ -1.26
LIG4-204ENST00000611712 MEF2CQ06413 473 aaPredicted RBP7.15□□□□□ -1.26
LIG4-204ENST00000611712 OR8B3Q8NGG8 313 aa7.15□□□□□ -1.26
LIG4-204ENST00000611712 MBD3L2Q8NHZ7 208 aaPredicted RBP7.15□□□□□ -1.26
LIG4-204ENST00000611712 CACNG8Q8WXS5 425 aa7.15□□□□□ -1.26
LIG4-204ENST00000611712 OR8B2Q96RD0 313 aa7.15□□□□□ -1.26
LIG4-204ENST00000611712 AAMDCQ9H7C9 122 aa7.15□□□□□ -1.26
LIG4-204ENST00000611712 GNB4Q9HAV0 340 aa7.15□□□□□ -1.26
LIG4-204ENST00000611712 TEX50A0A1B0GTY4 177 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 C15orf65H3BRN8 121 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 F2RL2O00254 374 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 IGLV2-14P01704 120 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 CD69Q07108 199 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 LINC00305Q7Z4B0 112 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 RPRMLQ8N4K4 120 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 FAM222BQ8WU58 562 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 HIGD1AQ9Y241 93 aa7.15□□□□□ -1.27
LIG4-204ENST00000611712 YTHDF2Q9Y5A9 579 aaKnown RBP7.15□□□□□ -1.27
LIG4-204ENST00000611712 ISLRO14498 428 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 TNFSF13O75888 250 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 SERF1AO75920 110 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 AMY1AP04745 511 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 TMEM11P17152 192 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 LGALS7P47929 136 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 FOXL1Q12952 345 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 C10orf55Q5SWW7 151 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ODF3L1Q8IXM7 274 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ABHD17AQ96GS6 310 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 TRBV9A0A0B4J1U6 114 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 IGHV1-69-2A0A0G2JMI3 117 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 A8MWL6 223 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 GNG7O60262 68 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 CEACAM3P40198 252 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ZNF134P52741 427 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 PRB3Q04118 309 aaPredicted RBP7.14□□□□□ -1.27
LIG4-204ENST00000611712 TMEM256Q8N2U0 113 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 LINC00469Q8N7U9 141 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ZNRD1Q9P1U0 126 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 CPAMD8Q8IZJ3 1885 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ZGRF1Q86YA3 2104 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 IGKV1-16P04430 117 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
LIG4-204ENST00000611712 MLANAQ16655 118 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ARSJQ5FYB0 599 aaPredicted RBP7.14□□□□□ -1.27
LIG4-204ENST00000611712 RAB1BQ9H0U4 201 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 ELOVL5Q9NYP7 299 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 HILPDAQ9Y5L2 63 aa7.14□□□□□ -1.27
LIG4-204ENST00000611712 IGHV2-70P01814 119 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 PYYP10082 97 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 GPX4P36969 197 aaPredicted RBP7.13□□□□□ -1.27
LIG4-204ENST00000611712 ACTL10Q5JWF8 245 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 SSX8Q7RTT4 187 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 PRNTQ86SH4 94 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 ZNF596Q8TC21 504 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 ZNF257Q9Y2Q1 563 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 BDP1A6H8Y1 2624 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 CDH23Q9H251 3354 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 TRAV5A0A0B4J249 113 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 IGLV1-44P01699 117 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 WNT2P09544 360 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 VDAC2P45880 294 aaPredicted RBP7.13□□□□□ -1.27
LIG4-204ENST00000611712 LBHQ53QV2 105 aaPredicted RBP7.13□□□□□ -1.27
LIG4-204ENST00000611712 DUX4L9Q6RFH8 374 aaPredicted RBP7.13□□□□□ -1.27
LIG4-204ENST00000611712 ZCCHC14Q8WYQ9 949 aaKnown RBP7.13□□□□□ -1.27
LIG4-204ENST00000611712 M0QZK8 103 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 CORTO00230 105 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 WISP2O76076 250 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 RNF224P0DH78 156 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 GBGT1Q8N5D6 347 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 GAFA1Q96PS6 74 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 NDUFAF3Q9BU61 184 aa7.13□□□□□ -1.27
LIG4-204ENST00000611712 TRAV9-1A0A075B6T8 112 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 PEX7O00628 323 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 NBEAP1P0C6P0 100 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 GZMBP10144 247 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 MAS1LP35410 378 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 FAM169BQ8N8A8 192 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 SNRNP40Q96DI7 357 aaKnown RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 BET1LQ9NYM9 111 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 RALYQ9UKM9 306 aaKnown RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 PPIAL4CA0A0B4J2A2 164 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 A0A1W2PRE2 83 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 PPIAL4GP0DN37 164 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 DAZAP2Q15038 168 aaPredicted RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 ZNF788Q6ZQV5 615 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 CENPVQ7Z7K6 275 aaPredicted RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 PRSS3P2Q8NHM4 247 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 DCAF16Q9NXF7 216 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 CCL21O00585 134 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 CA1P00915 261 aaPredicted RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 WT1P19544 449 aaPredicted RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 TMEM177Q53S58 311 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 ZNF295-AS1Q8N0V1 137 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 RNASEH2CQ8TDP1 164 aaKnown RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
LIG4-204ENST00000611712 C2orf83Q53S99 150 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 CDPF1Q6NVV7 123 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 ZNF114Q8NC26 417 aa7.12□□□□□ -1.27
LIG4-204ENST00000611712 OR4B1Q8NGF8 309 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms