RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BRS3P32247 399 aa16.71■□□□□ 0.26
SSBP3-216ENST00000610401 TRIP6Q15654 476 aaKnown RBP16.71■□□□□ 0.26
SSBP3-216ENST00000610401 LSM4Q9Y4Z0 139 aaKnown RBP16.71■□□□□ 0.26
SSBP3-216ENST00000610401 MGST3O14880 152 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 C11orf42Q8N5U0 333 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 SH3BGRL2Q9UJC5 107 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 GPX1P07203 203 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 OR5G3P0C626 314 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 MFAP2P55001 183 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 UBE2L3P68036 154 aaKnown RBP16.7■□□□□ 0.26
SSBP3-216ENST00000610401 ZNF503Q96F45 646 aa16.7■□□□□ 0.26
SSBP3-216ENST00000610401 IGHV3-72A0A0B4J1Y9 119 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 A0A1W2PS18 150 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 SH2D7A6NKC9 451 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-216ENST00000610401 E7EUB6 86 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 DLEU1O43261 78 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 SLAQ13239 276 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 LINC00869P0C866 280 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 USF1P22415 310 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-216ENST00000610401 FOXA3P55318 350 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-216ENST00000610401 IL19Q9UHD0 177 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 CORTO00230 105 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 RPL8P62917 257 aaKnown RBP16.69■□□□□ 0.26
SSBP3-216ENST00000610401 JPT1Q9UK76 154 aa16.69■□□□□ 0.26
SSBP3-216ENST00000610401 AKAP6Q13023 2319 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 YPEL1O60688 119 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 COMPP49747 757 aaPredicted RBP16.68■□□□□ 0.26
SSBP3-216ENST00000610401 PAFAH1B2P68402 229 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 RNASEKQ6P5S7 137 aaKnown RBP16.68■□□□□ 0.26
SSBP3-216ENST00000610401 YPEL2Q96QA6 119 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 SELENOKQ9Y6D0 94 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 CD59P13987 128 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 DIAPH2-AS1Q14236 149 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 SLC35D1Q9NTN3 355 aa16.68■□□□□ 0.26
SSBP3-216ENST00000610401 SIAH2O43255 324 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 C3orf79P0CE67 100 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 LEMD1Q68G75 181 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 CDC42EP3Q9UKI2 254 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 SPTBN1Q01082 2364 aaKnown RBP16.67■□□□□ 0.26
SSBP3-216ENST00000610401 SRRM5B3KS81 715 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 BMPR1BO00238 502 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 CCL3L1P16619 93 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 C17orf58Q2M2W7 97 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 PEAR1Q5VY43 1037 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-216ENST00000610401 FAM90A1Q86YD7 464 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 OR2D3Q8NGH3 330 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 PPP1R35Q8TAP8 253 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 ZGRF1Q86YA3 2104 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 ORM2P19652 201 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 RAB7AP51149 207 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 TEX43Q6ZNM6 134 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 STPG4Q8N801 248 aa16.67■□□□□ 0.26
SSBP3-216ENST00000610401 C22orf34Q6ZV56 151 aa16.66■□□□□ 0.26
SSBP3-216ENST00000610401 PRR7Q8TB68 274 aa16.66■□□□□ 0.26
SSBP3-216ENST00000610401 ZNF331Q9NQX6 463 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-216ENST00000610401 CEP295Q9C0D2 2601 aa16.66■□□□□ 0.26
SSBP3-216ENST00000610401 CDX4O14627 284 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-216ENST00000610401 ZNF137PP52743 207 aa16.66■□□□□ 0.26
SSBP3-216ENST00000610401 TMEM136Q6ZRR5 245 aa16.66■□□□□ 0.26
SSBP3-216ENST00000610401 TRGV10A0A0A0MS01 117 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 APCSP02743 223 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 TCTAP57738 103 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 BHLHA15Q7RTS1 189 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-216ENST00000610401 OR52E5Q8NH55 327 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 H1FXQ92522 213 aaKnown RBP16.65■□□□□ 0.26
SSBP3-216ENST00000610401 BORCS7Q96B45 105 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 CLEC5AQ9NY25 188 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 SLC45A2Q9UMX9 530 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 PROCRQ9UNN8 238 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 MOSP00540 346 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 SAA1P0DJI8 122 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-216ENST00000610401 SELENOTP62341 195 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 DEFB109BQ30KR1 87 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 HCP5Q6MZN7 132 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 TECRQ9NZ01 308 aaKnown RBP16.65■□□□□ 0.26
SSBP3-216ENST00000610401 PTPRBP23467 1997 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 HNRNPA3P51991 378 aaKnown RBP16.65■□□□□ 0.26
SSBP3-216ENST00000610401 DNAJC4Q9NNZ3 241 aa16.65■□□□□ 0.26
SSBP3-216ENST00000610401 TCTEX1D1Q8N7M0 179 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 NPIPB3Q92617 1050 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 TEX50A0A1B0GTY4 177 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 DPRXA6NFQ7 191 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 PRR20EP86478 221 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 PRR20CP86479 221 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 PRR20DP86480 221 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 PRR20BP86481 221 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 PRR20AP86496 221 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 TNXAQ16473 311 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 UNQ5815/PRO19632Q6UWF5 114 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 HARBI1Q96MB7 349 aa16.64■□□□□ 0.25
SSBP3-216ENST00000610401 HSBP1O75506 76 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 KLF3P57682 345 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-216ENST00000610401 CX3CL1P78423 397 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 KIR3DL3Q8N743 410 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 GSX1Q9H4S2 264 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-216ENST00000610401 TMEM14BQ9NUH8 114 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 MAP1AP78559 2803 aaPredicted RBP16.63■□□□□ 0.25
SSBP3-216ENST00000610401 ENSAO43768 121 aaKnown RBP16.63■□□□□ 0.25
SSBP3-216ENST00000610401 TCF24Q7RTU0 167 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 COMMD5Q9GZQ3 224 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms