RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ARHGAP35Q9NRY4 1499 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 PLXND1Q9Y4D7 1925 aa2.25□□□□□ -2.05
SMCHD1-213ENST00000609587 KIF13BQ9NQT8 1826 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 SCN1AP35498 2009 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 MYH11P35749 1972 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 IGHV1-69-2A0A0G2JMI3 117 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 TRDV1A0A1B0GX56 115 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 A8MWL6 223 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 A8MWP6 167 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 C4orf51C9J302 202 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 J3QQQ9 107 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 LST1O00453 97 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 SLC37A4O43826 429 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 OR7C2O60412 319 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 MAS1P04201 325 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 SOD3P08294 240 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF728P0DKX0 622 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 HLA-EP13747 358 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 EIF2B2P49770 351 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 TAS2R20P59543 309 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 GRB2P62993 217 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 HERVK_113P63121 156 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 RHOGP84095 191 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 MMDQ15546 238 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 Q6Q795 121 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 TMEM14EPQ6UXP3 125 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 MARCH3Q86UD3 253 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 LRP11Q86VZ4 500 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 IFT20Q8IY31 132 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 TCTE3Q8IZS6 198 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 ORMDL3Q8N138 153 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 C9orf62Q8N4C0 152 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 ANKRD29Q8N6D5 301 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 KRTCAP2Q8N6L1 136 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF555Q8NEP9 628 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 OR2M3Q8NG83 312 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 OR2T27Q8NH04 317 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 GNPNAT1Q96EK6 184 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 ERMAPQ96PL5 475 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 TRIB3Q96RU7 358 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 SNHG12Q9BXW3 62 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 SMIM3Q9BZL3 60 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 EIF5A2Q9GZV4 153 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 GTSF1LQ9H1H1 148 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 OR2D2Q9H210 308 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 OR5AC2Q9NZP5 309 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 MED11Q9P086 117 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 LAMTOR3Q9UHA4 124 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 RPUSD1Q9UJJ7 312 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 ANKRD12Q6UB98 2062 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 WNK3Q9BYP7 1800 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 DOCK6Q96HP0 2047 aa2.24□□□□□ -2.05
SMCHD1-213ENST00000609587 TSPOAP1O95153 1857 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 SBF1O95248 1867 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 DOCK5Q9H7D0 1870 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 ADGRL2O95490 1459 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 TRAV5A0A0B4J249 113 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 ARRDC5A6NEK1 342 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 A8MUN3 132 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 M0R143 59 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 M0R2Z0 102 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 M0R381 172 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 NCR2O95944 276 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 SMIM17P0DL12 118 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 BCL2P10415 239 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 PPIBP23284 216 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 GABRA3P34903 492 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 DEFA1P59665 94 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 RHEBQ15382 184 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF141Q15928 474 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 PABPC1L2AQ5JQF8 200 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 SNX29P2Q8IUI4 249 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 C8orf59Q8N0T1 100 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 OR8I2Q8N0Y5 310 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 OR5H6Q8NGV6 325 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 SGMS2Q8NHU3 365 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 MS4A6EQ96DS6 147 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 TEX37Q96LM6 180 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 DERL3Q96Q80 235 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 GPX7Q96SL4 187 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 NMNAT3Q96T66 252 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 CCL13Q99616 98 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 PSMG3Q9BT73 122 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 MRPL20Q9BYC9 149 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 NKX6-2Q9C056 277 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF436Q9C0F3 470 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 LINC00574Q9H8X3 128 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 TAF9BQ9HBM6 251 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 FBXL12Q9NXK8 326 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 SCN3BQ9NY72 215 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF492Q9P255 531 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 FMN1Q68DA7 1419 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 ATG2AQ2TAZ0 1938 aa2.23□□□□□ -2.05
SMCHD1-213ENST00000609587 MYO5BQ9ULV0 1848 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 SCN10AQ9Y5Y9 1956 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 TRAV30A0A087WSZ9 112 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 LOC107984640A0A0U1RRK4 108 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 SPAARA0A1B0GVQ0 90 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms