RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 SLC25A22Q9H936 323 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 TREM1Q9NP99 234 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 F11RQ9Y624 299 aaKnown RBP13.17□□□□□ -0.3
CTCFL-215ENST00000608158 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 CELSR2Q9HCU4 2923 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 CD5P06127 495 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 M6PRP20645 277 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MFAP2P55001 183 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 CCL20P78556 96 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 FXYD3Q14802 87 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 ACOT6Q3I5F7 207 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MIC13Q5XKP0 118 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 OR10G4Q8NGN3 311 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 SCRT1Q9BWW7 348 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 CENPEQ02224 2701 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 TMEM218A2RU14 115 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 NDPQ00604 133 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 RAB31Q13636 194 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MLANAQ16655 118 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 GUK1Q16774 197 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 LCN15Q6UWW0 184 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 Q8N9W7 124 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 C1RLQ9NZP8 487 aa13.16□□□□□ -0.3
CTCFL-215ENST00000608158 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 A0A0U1RQK1 487 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 YIF1AO95070 293 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 CX3CL1P78423 397 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 ARPC1AQ92747 370 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 MISP3Q96FF7 219 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 PBDC1Q9BVG4 233 aa13.15□□□□□ -0.3
CTCFL-215ENST00000608158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 CORTO00230 105 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 ADCYAP1P18509 176 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 B2MP61769 119 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 GCSAMLQ5JQS6 135 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 KLF17Q5JT82 389 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 FAM103A1Q9BTL3 118 aaKnown RBP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 ACTR3CQ9C0K3 210 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 HELZ2Q9BYK8 2649 aaKnown RBP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 EIF3GO75821 320 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 AVPP01185 164 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 DEFA4P12838 97 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 RPL29P47914 159 aaKnown RBP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 FGF8P55075 233 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-215ENST00000608158 PRR20EP86478 221 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 PRR20CP86479 221 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 PRR20DP86480 221 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 PRR20BP86481 221 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 PRR20AP86496 221 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 OR2T6Q8NHC8 308 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 DMRT1Q9Y5R6 373 aa13.14□□□□□ -0.31
CTCFL-215ENST00000608158 SEC14L6B5MCN3 397 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 C9JQL5 133 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 CTRB1P17538 263 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 OR10J1P30954 320 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-215ENST00000608158 CTRB2Q6GPI1 263 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 PRSS57Q6UWY2 283 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 Q96MF0 132 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 EIF5A2Q9GZV4 153 aaKnown RBP13.13□□□□□ -0.31
CTCFL-215ENST00000608158 SLC39A9Q9NUM3 307 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 SLC45A2Q9UMX9 530 aa13.13□□□□□ -0.31
CTCFL-215ENST00000608158 J3QLI3 93 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 CRYGCP07315 174 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 IGHV4-31P0DP07 118 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 PEA15Q15121 130 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 MEGF9Q9H1U4 602 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 MRPL36Q9P0J6 103 aaKnown RBP13.12□□□□□ -0.31
CTCFL-215ENST00000608158 IGHV7-81A0A0B4J1V7 117 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 CYB5BO43169 146 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 IGHV3-48P01763 117 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 SFTA3P0C7M3 94 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 TMEM249Q2WGJ8 235 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 RAB24Q969Q5 203 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
CTCFL-215ENST00000608158 HMGB3O15347 200 aaKnown RBP13.11□□□□□ -0.31
CTCFL-215ENST00000608158 TGFAP01135 160 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 PPT1P50897 306 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 RND2P52198 227 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 ASPHD1Q5U4P2 390 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 THAP8Q8NA92 274 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 RASL11BQ9BPW5 248 aa13.11□□□□□ -0.31
CTCFL-215ENST00000608158 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms