RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 APOC3P02656 99 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 OPRK1P41145 380 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 GGTLC1Q9BX51 225 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 FNDC4Q9H6D8 234 aaPredicted RBP15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 ZANQ9Y493 2812 aa15.27■□□□□ 0.04
TUBB4B-202ENST00000604929 CD5P06127 495 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 BRS3P32247 399 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 MFAP2P55001 183 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 EBI3Q14213 229 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 FXYD3Q14802 87 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 Q8N6K4 173 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 ABHD5Q8WTS1 349 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 ACY3Q96HD9 319 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 SLC39A9Q9NUM3 307 aa15.27■□□□□ 0.03
TUBB4B-202ENST00000604929 IGKV1OR2-108A0A075B7D4 117 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 SCO1O75880 301 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 AVPP01185 164 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 FAM122CQ6P4D5 195 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 MISP3Q96FF7 219 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 SCRT1Q9BWW7 348 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 SLC25A22Q9H936 323 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 PXMP4Q9Y6I8 212 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.26■□□□□ 0.037e-10■■■■□ 20.5
TUBB4B-202ENST00000604929 A0A096LNT2 108 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 IGHV3-21A0A0B4J1V1 117 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 MBP02144 154 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 HAGHQ16775 308 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 COMMD1Q8N668 190 aa15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 BEX4Q9NWD9 120 aaPredicted RBP15.26■□□□□ 0.03
TUBB4B-202ENST00000604929 M6PRP20645 277 aa15.25■□□□□ 0.03
TUBB4B-202ENST00000604929 Q5PR19 223 aa15.25■□□□□ 0.03
TUBB4B-202ENST00000604929 SLC16A13Q7RTY0 426 aa15.25■□□□□ 0.03
TUBB4B-202ENST00000604929 TMEM144Q7Z5S9 345 aa15.25■□□□□ 0.03
TUBB4B-202ENST00000604929 MRPL41Q8IXM3 137 aaKnown RBP15.25■□□□□ 0.03
TUBB4B-202ENST00000604929 RNASEH2CQ8TDP1 164 aaKnown RBP15.25■□□□□ 0.03
TUBB4B-202ENST00000604929 A0A0U1RQK1 487 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 YIF1AO95070 293 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 ADCYAP1P18509 176 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 GATA2P23769 480 aaPredicted RBP15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 CX3CL1P78423 397 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 RAB31Q13636 194 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 ACOT6Q3I5F7 207 aaPredicted RBP15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 LFNGQ8NES3 379 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 MBD3L1Q8WWY6 194 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 MAP1LC3B2A6NCE7 125 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 F8W036 122 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 TGFAP01135 160 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 HBE1P02100 147 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 GPX4P36969 197 aaPredicted RBP15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 B2MP61769 119 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 DEFA5Q01523 94 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 LINC01356Q8N9X3 169 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 CACNG8Q8WXS5 425 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 MAP1LC3BQ9GZQ8 125 aa15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 MRPL36Q9P0J6 103 aaKnown RBP15.24■□□□□ 0.03
TUBB4B-202ENST00000604929 RBFOX3A6NFN3 312 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 FNDC10F2Z333 226 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 CYB5BO43169 146 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 SFTA3P0C7M3 94 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 PPT1P50897 306 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 PEA15Q15121 130 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 ZNF562Q6V9R5 426 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 CCDC28AQ8IWP9 274 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 STPG3Q8N7X2 389 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 NPIPB3Q92617 1050 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 RAB24Q969Q5 203 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 SLC35E1Q96K37 410 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 SLC25A33Q9BSK2 321 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 PBDC1Q9BVG4 233 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 ACTR3CQ9C0K3 210 aaPredicted RBP15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 WNT10AQ9GZT5 417 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 TMPRSS5Q9H3S3 457 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 GNG13Q9P2W3 67 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 DMRT1Q9Y5R6 373 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 CSPG4Q6UVK1 2322 aa15.23■□□□□ 0.03
TUBB4B-202ENST00000604929 BTBD17A6NE02 478 aa15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 OR10J1P30954 320 aa15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 Q8N9W7 124 aa15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 OR1P1Q8NH06 330 aa15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 F11RQ9Y624 299 aaKnown RBP15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 ZNF469Q96JG9 3925 aaPredicted RBP15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 TRAV1-1A0A0B4J248 108 aa15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 TRAV20A0A0B4J274 112 aa15.22■□□□□ 0.03
TUBB4B-202ENST00000604929 ZFP92A6NM28 416 aa15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 NDPQ00604 133 aa15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 KLF17Q5JT82 389 aaPredicted RBP15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 TMEM219Q86XT9 240 aa15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 ZNF114Q8NC26 417 aa15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 C1RLQ9NZP8 487 aa15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 GCN1Q92616 2671 aaKnown RBP15.21■□□□□ 0.03
TUBB4B-202ENST00000604929 CTXND1A0A1B0GTU2 59 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 A0A1W2PPV4 95 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 SH2D7A6NKC9 451 aaPredicted RBP15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 FBP1P09467 338 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 RPL29P47914 159 aaKnown RBP15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 IQCF2Q8IXL9 164 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 LRRC75A-AS1Q8N1F1 130 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 Q96MF0 132 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 RASL11BQ9BPW5 248 aa15.21■□□□□ 0.02
TUBB4B-202ENST00000604929 SLC45A2Q9UMX9 530 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms